Results 1-48 of 48 (Search time: 0.004 seconds).
| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link | |
|---|---|---|---|---|---|---|---|
| 1 | 2022 | An integrated analysis of the cancer genome atlas data discovers a hierarchical association structure across thirty three cancer types | K.L. Tiong; N. Sintupisut; M.C. Lin; C.H. Cheng; A. Woolston; C.H. Lin; M. Ho; Y.W. Lin; S. Padakanti; C.H. Yeang | PLOS Digital Health 1(12), e0000151 | |||
| 2 | 2022 | Clustering image data with a fixed embedding | Chen, YB; Tiong, KL; Yeang, CH | ||||
| 3 | 2022 | Cooperative stability renders protein complex formation more robust and controllable | Hsu, KL; Yen, HS ; Yeang, CH | Scientific reports 12(1), 10490 | |||
| 4 | 2022 | Characterization of gene cluster heterogeneity in single-cell transcriptomic data within and across cancer types | Tiong, KL; Lin, YW; Yeang, CH | Biology open 11(6), bio059256 | |||
| 5 | 2021 | The C-degron pathway eliminates mislocalized proteins and products of deubiquitinating enzymes | Yeh, CW; Huang, WC; Hsu, PH; Yeh, KH; Wang, LC; Hsu, PW; Lin, HC; Chen, YN; Chen, SC; Yeang, CH ; Yen, HS | The EMBO journal 40(7), e105846 | |||
| 6 | 2021 | Genotypes of informative loci from 1000 Genomes data allude evolution and mixing of human populations | Padakanti, S; Tiong, KL; Chen, YB; Yeang, CH | Scientific reports 11, 17741 | |||
| 7 | 2020 | Population Histories of the United States Revealed through Fine-Scale Migration and Haplotype Analysis | Dai, Chengzhen L.; Vazifeh, Mohammad M.; Yeang, Chen-Hsiang ; Tachet, Remi; Wells, R. Spencer; Vilar, Miguel G.; Daly, Mark J.; Ratti, Carlo; Martin, Alicia R. | The American Journal of Human Genetics 106(3), 371-388 | |||
| 8 | 2019 | MGSEA - a multivariate Gene set enrichment analysis | Tiong, KL; Yeang, CH | BMC bioinformatics 20, 145 | |||
| 9 | 2019 | Modelling bistable tumour population dynamics to design effective treatment strategies | Akhmetzhanov AR; Kim JW; Sullivan R; Beckman RA; Tamayo P; Yeang CH | Journal of theoretical biology 474, 88-102 | |||
| 10 | 2018 | Explaining cancer type specific mutations with transcriptomic and epigenomic features in normal tissues. | Tiong, KL; Yeang, CH | Scientific reports 8, 11456 | |||
| 11 | 2017 | Exploring candidate biological functions by Boolean Function Networks for Saccharomyces cerevisiae | Simak, M.; Yeang, C.H. ; Lu, H.H. | PLOS ONE 12(10), e0185475 | |||
| 12 | 2017 | Decomposing Oncogenic Transcriptional Signatures to Generate Maps of Divergent Cellular States | Kim, JW; Abudayyeh, OO; Yeerna, H; Yeang, CH ; Stewart, M; Jenkins, RW; Kitajima, S; Konieczkowski, DJ; Medetgul-Ernar, K; Cavazos, T; Mah, C; Ting, S; Van Allen, EM; Cohen, O; Mcdermott, J; Damato, E; Aguirre, AJ; Liang, J; Liberzon, A; Alexe, G; Doench, J; Ghandi, M; Vazquez, F; Weir, BA; Tsherniak, A; Subramanian, A; Meneses-Cime, K; Park, J; Clemons, P; Garraway, LA; Thomas, D; Boehm, JS; Barbie, DA; Hahn, WC; Mesirov, JP; Tamayo, P. | Cell Systems 5(2), 105-118.e9 | |||
| 13 | 2017 | A quantitative model for the rate-limiting process of UGA alternative assignments to stop and selenocysteine codons | Chen, YF; Lin, HC; Chuang, KN; Lin, CH; Yen, HS ; Yeang, CH | PLoS computational biology 13(2), e1005367 | |||
| 14 | 2016 | Analysis of spatial-temporal gene expression patterns reveals dynamics and regionalization in developing mouse brain. | Chou, SJ ; Wang, C; Sintupisut, N; Niou, ZX; Lin, CH; Li, KC ; Yeang, CH | Scientific reports 6, 19274 | |||
| 15 | 2014 | Suppression of the SOX2 neural effector gene by PRDM1 promotes human germ cell fate in embryonic stem cells | I-Ying Lin; Feng-Lan Chiu; Chen-Hsiang Yeang ; Hsin-Fu Chen; Ching-Yu Chuang; Shii-Yi Yang; Pei-Shan Hou; Nardnisa Sintupisut; Hong-Nerng Ho; Hung-Chih Kuo ; Kuo-I Lin | Stem Cell Reports 2(2), 189-204 | |||
| 16 | 2013 | Sequence Mutations of Genes Pertaining to Malignancy in Cancer | N. Sintupisut; C.H. Yeang | Journal of Data Science 11(4), 673-714 | |||
| 17 | 2013 | An integrative characterization of recurrent molecular aberrations in glioblastoma genomes | N. Sintupisut; P.L. Liu; C.H. Yeang | NUCLEIC ACIDS RESEARCH 41(19), 8803-8821 | |||
| 18 | 2013 | Functional characterization of motif sequences under purifying selection | D.H. Chen; Y.F. Chang; B.Y. Liao; C.H. Yeang | NUCLEIC ACIDS RESEARCH 41(4), 2105-2120 | |||
| 19 | 2012 | Impact of genetic dynamics and single-cell heterogeneity on development of nonstandard personalized medicine strategies for cancer | Beckman, R. A.; Schemmann, G. S.; Yeang, C. H. | PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 109(36):14586-14591 | |||
| 20 | 2012 | Recurrent structural motifs reflect characteristics of distinct networks | Yeang, C. H. ; Huang, L. C.; Liu, W. C. | ||||
| 21 | 2012 | Evolution of domain architectures and catalytic functions of enzymes | Suen, Summit; Lu, Henry Horng-Shing; Yeang, Chen-Hsiang | Genome Biology and Evolution Epub ahead of print | |||
| 22 | 2012 | Genome-wide gene expression analysis implicates the immune response and lymphangiogenesis in the pathogenesis of fetal chylothorax | Yeang, Chen-Hsiang ; Ma, Gwo-Chin; Shih, Jin-Chung; Yang, Yu-Shih; Chen, Chih-Ping; Chang, Shun-Ping; Wu, Sheng-Hai; Liu, Chin-San; Kuo, Shou-Jen; Chou, Hung-Chieh; Hwu, Wuh-Liang; Cameron, Alan D.; Ginsberg, Norman A.; Chen, Ming | PLoS One 7(4):e34901 | |||
| 23 | 2011 | Deciphering causal and statistical relations of molecular aberrations and gene expressions in NCI-60 cell lines. | Li, SD; Tagami, T; Ho, YF; Yeang, CH | BMC systems biology 5(1), 186 | |||
| 24 | 2011 | Integration of metabolic reactions and gene regulation. | Yeang, CH | Molecular biotechnology 47(1), 70-82 | |||
| 25 | 2010 | A probabilistic graphical model of quantum systems | Yeang, Chen-Hsiang | ||||
| 26 | 2010 | Quantifying the strength of natural selection of a motif sequence | Yeang, Chen-Hsiang | ||||
| 27 | 2010 | Exact loopy belief propagation on Euler graphs | Yeang, Chen-Hsiang | ||||
| 28 | 2010 | An integrated analysis of molecular aberrations in NCI-60 cell lines. | Yeang, CH | BMC bioinformatics 11, 495 | |||
| 29 | 2009 | A factor graph nested effects model to identify networks from genetic perturbations. | Vaske, C. J.; House, C.; Luu, T.; Frank, B.; Yeang, C. H. ; Lee, N.; Stuart, J. M. | PLoS Computational Biology 9(5) | |||
| 30 | 2009 | Integration of metabolic reactions and gene regulation. | Yeang, CH | Methods in molecular biology (Clifton, N.J.) (New York : Springer) | |||
| 31 | 2009 | Inferring disease-related pathways using a probabilistic epistasis model. | Kanabar, P. N.; Vaske, C. J.; Yeang, C. H. ; Yildiz, F. H.; Stuart, J. M. | ||||
| 32 | 2008 | Identifying coevolving partners from paralogous gene families. | Yeang, C. H. | Evolutionary Bioinformatics 4:91-107 | |||
| 33 | 2008 | Combinatorial patterns of somatic gene mutations in cancer. | Yeang, CH ; McCormick, F; Levine, A | The FASEB journal : official publication of the Federation of American Societies for Experimental Biology 22(8), 2605-22 | |||
| 34 | 2007 | Detecting the coevolution of biosequences--an example of RNA interaction prediction. | Yeang, CH ; Darot, JF; Noller, HF; Haussler, D | Molecular biology and evolution 24(9), 2119-31 | |||
| 35 | 2007 | Detecting coevolution in and among protein domains. | Yeang, CH ; Haussler, D | PLoS computational biology 3(11), e211 | |||
| 36 | 2006 | Modeling the combinatorial functions of multiple transcription factors. | Yeang, CH ; Jaakkola, T | Journal of computational biology : a journal of computational molecular cell biology 13(2), 463-80 | |||
| 37 | 2006 | A joint model of regulatory and metabolic networks. | Yeang, CH ; Vingron, M | BMC bioinformatics 7, 332 | |||
| 38 | 2006 | Game theoretic algorithms for protein-DNA binding. | Perez-Breva, L.; Ortiz, L. E.; Yeang, C. H. ; Jaakkola, T. | ||||
| 39 | 2006 | Detecting the dependent evolution of biosequences. | Darot, J.; Yeang, C. H. ; Haussler, D. | ||||
| 40 | 2005 | Validation and refinement of gene-regulatory pathways on a network of physical interactions. | Yeang, CH ; Mak, HC; McCuine, S; Workman, C; Jaakkola, T; Ideker, T | Genome biology 6(7), R62 | |||
| 41 | 2005 | Modeling the combinatorial functions of multiple transcription factors. | Yeang, C. H. ; Jaakkola, T. | ||||
| 42 | 2004 | Physical network models. | Yeang, CH ; Ideker, T; Jaakkola, T | Journal of computational biology : a journal of computational molecular cell biology 11(2-3), 243-62 | |||
| 43 | 2003 | Time-series analysis of gene expression and location data. | Yeang, C. H. ; Jaakkola, T. | ||||
| 44 | 2003 | Continuous Markov random walks. | Yeang, C. H. ; Szummer, M. | ||||
| 45 | 2003 | Physical network models and multi-source data integration. | Yeang, C. H. ; Jaakkola, T. | ||||
| 46 | 2002 | An information geometric perspective on active learning. | Yeang, C. H. | ||||
| 47 | 2001 | Molecular classification of multiple tumor types. | Yeang, CH ; Ramaswamy, S; Tamayo, P; Mukherjee, S; Rifkin, RM; Angelo, M; Reich, M; Lander, E; Mesirov, J; Golub, T | ||||
| 48 | 2001 | Multiclass cancer diagnosis using tumor gene expression signatures. | Ramaswamy, S; Tamayo, P; Rifkin, R; Mukherjee, S; Yeang, CH ; Angelo, M; Ladd, C; Reich, M; Latulippe, E; Mesirov, JP; Poggio, T; Gerald, W; Loda, M; Lander, ES; Golub, TR | Proceedings of the National Academy of Sciences of the United States of America 98(26), 15149-54 |
