Publications

Results 1-25 of 25 (Search time: 0.004 seconds).

Issue DateTitleAuthor(s)RelationscopusWOSFulltext/Archive link
12022Multiomic analyses reveal enriched glycolytic processes in β-myosin heavy chain-expressed cardiomyocytes in early cardiac hypertrophyYeh, Hsiao-hui; Chang, Yao-Ming ; Chang, Yu-Wang; Lu, Mei-Yeh Jade ; Chen, Yi-Hua; Lee, Chia-Che; Chen, Chien-Chang Journal of Molecular and Cellular Cardiology Plus 1, 100011
22022Regulators of early maize leaf development inferred from transcriptomes of laser capture microdissection (LCM)-isolated embryonic leaf cellsLiu, Wen-Yu; Yu, Chun-Ping; Chang, Chao-Kang; Chen, Hsiang-June; Li, Meng-Yun; Chen, Yi-Hua; Shiu, Shin-Han; Ku, Maurice S. B.; Tu, Shih-Long ; Lu, Mei-Yeh Jade ; Li, Wen-Hsiung Proceedings of the National Academy of Sciences of the United States of America 119(35), e2208795119
32022Extensive sampling of Saccharomyces cerevisiae in Taiwan reveals ecology and evolution of predomesticated lineagesLee, Tracy J; Liu, Yuching; Liu, Wei-An; Lin, Yu-Fei; Lee, Hsin-Han; Ke, Huei-Mien; Huang, Jen-Pen ; Lu, Mei-Yeh Jade ; Hsieh, Chia-Lun; Chung, Kuo-Fang ; Liti, Gianni; Tsai, Isheng J Genome Research 32(5), 864-877
42022Maize Golden2-like transcription factors boost rice chloroplast development, photosynthesis, and grain yieldYeh, Su-Ying; Lin, Hsin-Hung; Chang, Yao-Ming ; Chang, Yu-Lun; Chang, Chao-Kang; Huang, Yi-Cin; Ho, Yi-Wen; Lin, Chu-Yin; Zheng, Jun-Ze; Jane, Wann-Neng ; Ng, Chun-Yeung; Lu, Mei-Yeh ; Lai, I-Ling; To, Kin-Ying ; Li, Wen-Hsiung ; Ku, Maurice S BPlant physiology 188(1), 442-459
52022phiC31 integrase for recombination-mediated single-copy insertion and genome manipulation in Caenorhabditis elegansYang, Fang-Jung; Chen, Chiao-Nung; Chang, Tiffany; Cheng, Ting-Wei; Chang, Ni-Chen; Kao, Chia-Yi; Lee, Chih-Chi; Huang, Yu-Ching; Hsu, Jung-Chen; Li, Jengyi; Lu, Meiyeh J ; Chan, Shih-Peng; Wang, John GENETICS 220(2), iyab206
62022Genome Assembly and Evolutionary Analysis of the Mandarin Duck Aix galericulata Reveal Strong Genome Conservation among DucksNg, Chen Siang; Lai, Cheng-Kuo; Ke, Huei-Mien; Lee, Hsin-Han; Chen, Chih-Feng; Tang, Pin-Chi; Cheng, Hsu-Chen; Lu, Meiyeh J. ; Li, Wen-Hsiung ; Tsai, Isheng Jason Genome Biology and Evolution 14(6), evac083
72021Whole-Genome Sequence Resource of Calonectria ilicicola, the Casual Pathogen of Soybean Red Crown RotLiu, Hsien-Hao; Wang, Jie; Wu, Ping-Hu; Lu, Mei-Yeh Jade ; Li, Jeng-Yi; Shen, Yuan-Min; Tzeng, Min-Nan; Kuo, Chang-Hsin; Lin, Ying-Hong; Chang, Hao-XunMolecular Plant-Microbe Interactions® 34(7), 848-851
82021Whole-Genome Duplication Facilitated the Evolution of C4 Photosynthesis in Gynandropsis gynandraHuang, Chi-Fa; Liu, Wen-Yu; Lu, Mei-Yeh Jade ; Chen, Yi-Hua; Ku, Maurice S, B; Li, Wen-Hsiung Molecular Biology and Evolution 38(11), 4715-4731
92021Prognostic Genetic Biomarkers Based on Oncogenic Signaling Pathways for Outcome Prediction in Patients with Oral Cavity Squamous Cell CarcinomaFan, Wen-Lang; Yang, Lan-Yan; Hsieh, Jason Chia-Hsun; Lin, Tsung-Chieh; Lu, Mei-Yeh Jade ; Liao, Chun-TaCancers 13(11), 2709
102021The rectal mucosal but not fecal microbiota detects subclinical ulcerative colitisLin, Yu-Fei; Sung, Chang Mu; Ke, Huei-Mien; Kuo, Chia-Jung; Liu, Wei-an; Tsai, Wen-Sy; Lin, Cheng-Yu; Cheng, Hao-Tsai; Lu, Meiyeh J ; Tsai, Isheng J.; Hsieh, Sen-YungGut Microbes 13(1), 1832856
112021Chromosomal-level genome assembly of the semi-dwarf rice Taichung Native 1, an initiator of Green RevolutionPanibe, Jerome P.; Wang, Long; Li, Jengyi; Li, Meng-Yun; Lee, Yi-Chen; Wang, Chang-Sheng; Ku, Maurice S.B.; Lu, Mei-Yeh Jade ; Li, Wen-HsiungGenomics 113(4), 2656-2674
122020Molecular asymmetry in the cephalochordate embryo revealed by single-blastomere transcriptome profilingLin, C.Y.; Lu, M.Y.J. ; Yue, J.X.; Li, K.L.; Le Petillon, Y.; Yong, L.W.; Chen, Y.H.; Tsai, F.Y.; Lyu, Y.F.; Chen, C.Y.; Hwang, S.P.L. ; Su, Y.H. ; Yu, J.K. PLOS GENETICS 16(12), e1009294
132020Mycena genomes resolve the evolution of fungal bioluminescenceKe, Huei-Mien; Lee, Hsin-Han; Lin, Chan-Yi Ivy; Liu, Yu-Ching; Lu, Min R.; Hsieh, Jo-Wei Allison; Chang, Chiung-Chih; Wu, Pei-Hsuan; Lu, Meiyeh Jade ; Li, Jeng-Yi; Shang, Gaus; Lu, Rita Jui-Hsien; Nagy, László G.; Chen, Pao-Yang ; Kao, Hsiao-Wei; Tsai, Isheng Jason Proceedings of the National Academy of Sciences 117(49), 31267-31277
142020Analysis of genomic distributions of SARS-CoV-2 reveals a dominant strain type with strong allelic associationsYang, H. C. ; Chen, C. H. ; Wang, J. H.; Liao, H. C.; Yang, C. T.; Chen, C. W.; Lin, Y. C.; Kao, C. H.; Lu, M. Y. J. ; Liao, J. C.Proceedings of the National Academy of Sciences of the United States of America 117(48), 30679-30686
152020Maize ANT1 modulates vascular development, chloroplast development, photosynthesis, and plant growthLiu, WY; Lin, HH; Yu, CP; Chang, CK; Chen, HJ; Lin, JJ; Lu, MY ; Tu, SL; Shiu, SH; Wu, SH ; Ku, MSB; Li, WH PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 117(35), 21747-21756
162020Behavioral and brain- transcriptomic synchronization between the two opponents of a fighting pair of the fish Betta splendens.Vu, Trieu-Duc; Iwasaki, Yuki; Shigenobu, Shuji; Maruko, Akiko; Oshima, Kenshiro; Iioka, Erica; Huang, Chao-Li; Abe, Takashi; Tamaki, Satoshi; Lin, Yi-Wen; Chen, Chih-Kuan; Lu, Mei-Yeh ; Hojo, Masaru; Wang, Hao-Ven; Tzeng, Shun-Fen; Huang, Hao-Jen; Kanai, Akio; Gojobori, Takashi; Chiang, Tzen-Yuh; Sun, H. Sunny; Li, Wen-Hsiung ; Okada, NorihiroPLoS Genetics 16(6), e1008831
172020Piwi reduction in the aged niche eliminates germline stem cells via Toll-GSK3 signalingKun-Yang Lin; Wen-Der Wang; Chi-Hung Lin; Elham Rastegari; Yu-Han Su; Yu-Tzu Chang; Yung-Feng Liao ; Yi-Chieh Chang; Haiwei Pi; Bo-Yi Yu; Shu-Hwa Chen; Chung-Yen Lin ; Mei-Yeh Lu ; Tsu-Yi Su; Fei-Yang Tzou; Chih-Chiang Chan; Hwei-Jan Hsu Nature Communications 11, 3147
182020Genomic Analysis of Mycobacterium tuberculosis Isolates and Construction of a Beijing Lineage Reference GenomeW.-F. Wang; M.-Y. Jade Lu ; T.-J. R. Cheng; Y.-C. Tang; Y.-C. Teng; T.-Y. Hwa; Y.-H. Chen; M.-Y. Li; M.-H. Wu; P.-C. Chuang; R. Jou; C.-H. Wong ; W.-H. Li Genome Biology and Evolution 12(2), 3890-3905
192019Blast fungal genomes show frequent chromosomal changes, gene gains and losses, and effector gene turnoverGomez Luciano, LB; Tsai, IJ ; Chuma, I; Tosa, Y; Chen, YH; Li, JY; Li, MY; Jade Lu, MY ; Nakayashiki, H; Li, WH Molecular Biology and Evolution 36(6), 1148-1161
202019The SnRK1-eIFiso4G1 signaling relay regulates the translation of specific mRNAs in Arabidopsis under submergenceCho, HY; Lu, MJ ; Shih, MC New phytologist 222(1), 366-381
212019Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes.Chang, YM; Lin, HH; Liu, WY; Yu, CP; Chen, HJ; Wartini, PP; Kao, YY; Wu, YH; Lin, JJ; Lu, MJ ; Tu, SL ; Wu, SH ; Shiu, SH; Ku, MSB; Li, WH Proceedings of the National Academy of Sciences of the United States of America 116(8), 3091-3099
222019Degradome Sequencing in PlantsShih-Shun Lin; Yihua Chen; Mei-Yeh Jade Lu Plant MicroRNAs - Methods and Protocols (USA : MiMB Springer, Humana Press)
232019Predicting clinical outcomes of cirrhosis patients with hepatic encephalopathy from the fecal microbiome.Sung, CM; Lin, YF; Chen, KF; Ke, HM; Huang, HY; Gong, YN; Tsai, WS; Lu, MJ ; Cheng, HT; Lin, CY; Kuo, CJ; Tsai, IJ ; Hsieh, SYCellular and molecular gastroenterology and hepatology 8(2), 301-318.e2
242018Integrative transcriptome sequencing reveals extensive alternative trans-splicing and cis-backsplicing in human cellsChuang, Trees-Juen ; Chen, Yen-Ju; Chen, Chia-Ying; Mai, Te-Lun; Wang, Yi-Da; Yeh, Chung­Shu; Yang, Min-Yu; Hsiao, Yu-Ting; Chang, Tien-Hsien ; Kuo, Tzu-Chien; Cho, Hsin-Hua; Shen, Chia-Ning  ; Kuo, Hung-Chih ; Lu, Mei-Yeh ; Chen, Yi-Hua; Hsieh, Shan-Chi; Chiang, Tai-WeiNUCLEIC ACIDS RESEARCH 46(7), 3671-3691
252014Genomic and transcriptomic analyses of the medicinal fungus Antrodia cinnamomea for its metabolite biosynthesis and sexual development.Lu, MY ; Fan, WL; Wang, WF; Chen, T; Tang, YC; Chu, FH; Chang, TT; Wang, SY; Li, MY; Chen, YH; Lin, ZS; Yang, KJ; Chen, SM; Teng, YC; Lin, YL; Shaw, JF; Wang, TF ; Li, WH Proceedings of the National Academy of Sciences of the United States of America 111(44), E4743-E4752