Publications

Results 1-37 of 37 (Search time: 0.004 seconds).

Issue DateTitleAuthor(s)RelationscopusWOSFulltext/Archive link
12024Mapping geological events and nitrogen fixation evolution onto the timetree of the evolution of nitrogen-fixation genesPi, HW; YR Chiang ; WH Li MOLECULAR BIOLOGY AND EVOLUTION 41(2), msae023
22023C4 leaf development and evolutionHuang, CF; Liu, WY; Yu, CP; Wu, SH ; Ku, MSB; Li, WH CURRENT OPINION IN PLANT BIOLOGY 76, 102454
32023Simultaneous detection of miRNA and mRNA at the single-cell level in plant tissuesWu, CC; Hsieh, KT; Yeh, SY; Lu, YT; Chen, LJ; Ku, MSB; Li, WH Plant biotechnology journal 21(1), 136-149
42023Genome analysis of SARS-CoV-2 isolates from a population reveals the rapid selective sweep of a haplotype carrying many pre-existing and new mutationsBhattacharjee, MJ; Bhattacharya, A; Kashyap, B; Taw, MJ; Li, WH ; Mukherjee, AK; Khan, MRVirology journal 20(1), 201
52023Horizontally Transferred DNA in the Genome of the Fungus Pyricularia oryzae is Associated With Repressive Histone ModificationsKobayashi, N; Dang, TA; Pham, KTM; Gomez, Luciano LB; Van Vu, B; Izumitsu, K; Shimizu, M; Ikeda, KI; Li, WH ; Nakayashiki, HMolecular biology and evolution 40(9), msad186
62023Chicken HOXC8 and HOXC10 genes may play a role in the altered skull morphology associated with the Crest phenotypeTsai, DY; Chen, JJ; Su, PC; Liu, IM; Yeh, SH; Chen, CK; Cheng, HC; Chen, CF; Li, WH ; Ng, CSJournal of experimental zoology. Part B, Molecular and developmental evolution 340(6), 392-402
72023Lactobacillus plantarum isolated from kefir enhances immune responses and survival of white shrimp (Penaeus vannamei) challenged with Vibrio alginolyticusTseng, KC; Huang, HT; Huang, SN; Yang, FY; Li, WH ; Nan, FH; Lin, YJFish & shellfish immunology 135, 108661
82023Rice GA3ox1 modulates pollen starch granule accumulation and pollen wall developmentHsieh, KT; Wu, CC; Lee, SJ; Chen, YH; Shiue, SY; Liao, YC; Liu, SH; Wang, IW; Tseng, CS; Li, WH ; Wang, CS; Chen, LJPloS one 18(10), e0292400
92022Origin and Evolution of Nitrogen Fixation in ProkaryotesPi, HW; Lin, JJ; Chen, CA; Wang, PH; Chiang, YR ; Huang, CC; Young, CC; Li, WH Molecular biology and evolution 39(9), msac181
102022Regulators of early maize leaf development inferred from transcriptomes of laser capture microdissection (LCM)-isolated embryonic leaf cellsLiu, Wen-Yu; Yu, Chun-Ping; Chang, Chao-Kang; Chen, Hsiang-June; Li, Meng-Yun; Chen, Yi-Hua; Shiu, Shin-Han; Ku, Maurice S. B.; Tu, Shih-Long ; Lu, Mei-Yeh Jade ; Li, Wen-Hsiung Proceedings of the National Academy of Sciences of the United States of America 119(35), e2208795119
112022Maize Golden2-like transcription factors boost rice chloroplast development, photosynthesis, and grain yieldYeh, Su-Ying; Lin, Hsin-Hung; Chang, Yao-Ming ; Chang, Yu-Lun; Chang, Chao-Kang; Huang, Yi-Cin; Ho, Yi-Wen; Lin, Chu-Yin; Zheng, Jun-Ze; Jane, Wann-Neng ; Ng, Chun-Yeung; Lu, Mei-Yeh ; Lai, I-Ling; To, Kin-Ying ; Li, Wen-Hsiung ; Ku, Maurice S BPlant physiology 188(1), 442-459
122022Two genomic regions of a sodium azide induced rice mutant confer broad-spectrum and durable resistance to blast diseaseLo, KL; Chen, YN; Chiang, MY; Chen, MC; Panibe, JP; Chiu, CC; Liu, LW; Chen, LJ; Chen, CW; Li, WH ; Wang, CSRice(New York, N.Y.) 15, 2
132022Second-generation bioethanol production from phytomass after phytoremediation using recombinant bacteria-yeast co-cultureTusher, TR; Chang, JJ; Saunivalu, MI; Wakasa, S; Li, WH ; Huang, CC; Inoue, C; Chien, MFFuel 326, 124975-124975
142022Genome Assembly and Evolutionary Analysis of the Mandarin Duck Aix galericulata Reveal Strong Genome Conservation among DucksNg, Chen Siang; Lai, Cheng-Kuo; Ke, Huei-Mien; Lee, Hsin-Han; Chen, Chih-Feng; Tang, Pin-Chi; Cheng, Hsu-Chen; Lu, Meiyeh J. ; Li, Wen-Hsiung ; Tsai, Isheng Jason Genome Biology and Evolution 14(6), evac083
152022Identifying mutations in sd1, Pi54 and Pi-ta, and positively selected genes of TN1, the first semidwarf rice in Green RevolutionPanibe, JP; Wang, L; Lee, YC; Wang, CS; Li, WH Botanical studies 63(1), 9
162022Safety Assessment of 3S, 3'S Astaxanthin Derived from Metabolically Engineered K. marxianusSamuel, SY; Wang, HD; Huang, MY; Cheng, YS; Chen, JR; Li, WH ; Chang, JJAntioxidants 11(11), 2288
172021Adventures of a Mathematician in Evolutionary BiologyLi, WH Genome Biology and Evolution 13(3), evab012
182021Whole-Genome Duplication Facilitated the Evolution of C4 Photosynthesis in Gynandropsis gynandraHuang, Chi-Fa; Liu, Wen-Yu; Lu, Mei-Yeh Jade ; Chen, Yi-Hua; Ku, Maurice S, B; Li, Wen-Hsiung Molecular Biology and Evolution 38(11), 4715-4731
192021Tryptophan plays an important role in yeast's tolerance to isobutanolLiu, HL; Wang, CH; Chiang, EI; Huang, CC; Li, WH Biotechnology for biofuels 14, 200
202020Maize ANT1 modulates vascular development, chloroplast development, photosynthesis, and plant growthLiu, WY; Lin, HH; Yu, CP; Chang, CK; Chen, HJ; Lin, JJ; Lu, MY ; Tu, SL; Shiu, SH; Wu, SH ; Ku, MSB; Li, WH PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 117(35), 21747-21756
212020Behavioral and brain- transcriptomic synchronization between the two opponents of a fighting pair of the fish Betta splendens.Vu, Trieu-Duc; Iwasaki, Yuki; Shigenobu, Shuji; Maruko, Akiko; Oshima, Kenshiro; Iioka, Erica; Huang, Chao-Li; Abe, Takashi; Tamaki, Satoshi; Lin, Yi-Wen; Chen, Chih-Kuan; Lu, Mei-Yeh ; Hojo, Masaru; Wang, Hao-Ven; Tzeng, Shun-Fen; Huang, Hao-Jen; Kanai, Akio; Gojobori, Takashi; Chiang, Tzen-Yuh; Sun, H. Sunny; Li, Wen-Hsiung ; Okada, NorihiroPLoS Genetics 16(6), e1008831
222020Constructing a human complex type N-linked glycosylation pathway in Kluyveromyces marxianusMing-Hsuan Lee; Tsui-Ling Hsu ; Jinn-Jy Lin; Yu-Ju Lin; Yi-Ying Kao; Jui-Jen Chang; Wen-Hsiung Li PloS one 15(5), e0233492
232020Constructing a yeast to express the largest cellulosome complex on the cell surfaceAnandharaj, M; Lin, YJ; Rani, RP; Nadendla, EK; Ho, MC; Huang, CC; Cheng, JF; Chang, JJ; Li, WH Proceedings of the National Academy of Sciences of the United States of America 117(5), 2385-2394
242020Genomic Analysis of Mycobacterium tuberculosis Isolates and Construction of a Beijing Lineage Reference GenomeW.-F. Wang; M.-Y. Jade Lu ; T.-J. R. Cheng; Y.-C. Tang; Y.-C. Teng; T.-Y. Hwa; Y.-H. Chen; M.-Y. Li; M.-H. Wu; P.-C. Chuang; R. Jou; C.-H. Wong ; W.-H. Li Genome Biology and Evolution 12(2), 3890-3905
252019Large-scale identification and functional analysis of NLR genes in blast resistance in the Tetep rice genome sequence.Wang, L; Zhao, L; Zhang, X; Zhang, Q; Jia, Y; Wang, G; Li, S; Tian, D; Li, WH ; Yang, SProceedings of the National Academy of Sciences of the United States of America 116(37), 18479-18487
262019Many human RNA viruses show extraordinarily stringent selective constraints on protein evolution.Lin, JJ; Bhattacharjee, MJ; Yu, CP; Tseng, YY; Li, WH Proceedings of the National Academy of Sciences of the United States of America 116(38), 19009-19018
272019Characterizing an engineered carotenoid-producing yeast as an anti-stress chassis for building cell factories.Liu, HL; Chang, JJ; Thia, C; Lin, YJ; Lo, SC; Huang, CC; Li, WH Microbial cell factories 18(1), 155
282019Blast fungal genomes show frequent chromosomal changes, gene gains and losses, and effector gene turnoverGomez Luciano, LB; Tsai, IJ ; Chuma, I; Tosa, Y; Chen, YH; Li, JY; Li, MY; Jade Lu, MY ; Nakayashiki, H; Li, WH Molecular Biology and Evolution 36(6), 1148-1161
292019Comparative transcriptomics method to infer gene coexpression networks and its applications to maize and rice leaf transcriptomes.Chang, YM; Lin, HH; Liu, WY; Yu, CP; Chen, HJ; Wartini, PP; Kao, YY; Wu, YH; Lin, JJ; Lu, MJ ; Tu, SL ; Wu, SH ; Shiu, SH; Ku, MSB; Li, WH Proceedings of the National Academy of Sciences of the United States of America 116(8), 3091-3099
302019Feather evolution from precocial to altricial birdsChen, C-K; H-F Chuang; S-M Wu; W-H Li Zoological Studies 58, e24
312018Genome-wide prediction of CRISPR/Cas9 targets in Kluyveromyces marxianus and its application to obtain a stable haploid strain.Lee, MH; Lin, JJ; Lin, YJ; Chang, JJ; Ke, HM; Fan, WL; Wang, TY ; Li, WH Scientific reports 8, 7305
322018Genetic and Molecular Basis of Feather Diversity in BirdsNg, CS; Li, WH Genome biology and evolution 10(10), 2572-2586
332017Comparative genomics of Vibrio campbellii strains and core species of the Vibrio Harveyi cladeKe, Huei-Mien; Prachumwat, Anuphap; Yu, Chun-Ping; Yang, Yi-Ting; Promsri, Sutitcha; Liu, Kuan-Fu; Lo, Chu-Fang; Lu, Mei-Yeh Jade; Lai, Mei-Chin; Tsai, Isheng J. ; Li, Wen-Hsiung Scientific Reports 7, 41394
342014Functional Evolution of cardiac microRNAs in heart development and functionsLin, C.C.; Chang, Y.M. ; Pan, C.T.; Chen, C.C. ; Ling, L.; Tsao, K.C.; Yang, R.B.; Li, W.H MOLECULAR BIOLOGY AND EVOLUTION 31(10), 2722-2734
352014Genomic and transcriptomic analyses of the medicinal fungus Antrodia cinnamomea for its metabolite biosynthesis and sexual development.Lu, MY ; Fan, WL; Wang, WF; Chen, T; Tang, YC; Chu, FH; Chang, TT; Wang, SY; Li, MY; Chen, YH; Lin, ZS; Yang, KJ; Chen, SM; Teng, YC; Lin, YL; Shaw, JF; Wang, TF ; Li, WH Proceedings of the National Academy of Sciences of the United States of America 111(44), E4743-E4752
362009Uncovering small RNA-mediated responses to phosphate-deficiency in Arabidopsis by deep sequencingHsieh, L. -C.; Lin, S. -I.; Shih, A C. -C. ; Chen, J. -W.; Lin, W. -Y.; Tseng, C. -Y.; Li, W. -H. ; Chiou, T. -J. PLANT PHYSIOLOGY 151(4), 2120-2132
372007MYBS: A comprehensive web server for mining transcription factor binding sites in yeastTsai, H. K. ; Chou, M. Y.; Shih, C. H.; Huang, Grace T. W.; Chang, T. H. ; Li, W. H. Nucleic Acids Research 35(suppl_2), W221-W226