Results 1-24 of 24 (Search time: 0.006 seconds).

Issue DateTitleAuthor(s)RelationscopusWOSFulltext/Archive link
12020GSAlign: an efficient sequence alignment tool for intra-species genomesHsin-Nan Lin; Wen-Lian Hsu BMC Genomics 21, 182
22019N-GlyDE: a two-stage N-linked glycosylation site prediction incorporating gapped dipeptides and pattern-based encodingThejkiran Pitti; Ching-Tai Chen; Hsin-Nan Lin; Wai-Kok Choong; Wen-Lian Hsu ; Ting-Yi Sung Scientific Reports 9, 15975
32018Hierarchical and programmable one-pot synthesis of oligosaccharidesCheng-Wei Cheng; Yixuan Zhou; Wen-Harn Pan ; Supriya Dey; Chung-Yi Wu ; Wen-Lian Hsu ; Chi-Huey Wong Nature Communications 9, 5202
42017CIAL Valence-Arousal Analysis System at IJCNLP 2017 Shared Task: Dimensional Sentiment Analysis for Chinese Words and PhrasesZheng-Wen Lin; Yung-Chun Chang; Chen-Ann Wang; Yu-Lun Hsieh; Wen-Lian Hsu Dimensional Sentiment Analysis for Chinese Words (IJCNLP 2017)
52017Pregnant Women Recognition from Social Media for Health-related Information ExplorationYi-Jie Huang; Chu Hsien Su; Yi-Chun Chang; Tseng-Hsin Ting; Tzu-Yuan Fu; Rou-Min Wang; Hong-Jie Dai; Yung-Chun Chang; Jitendra Jonnagaddala; Wen-Lian Hsu The First International Workshop on Digital Disease Detection using Social Media (IJCNLP 2017)
62017iTop-Q: an Intelligent Tool for Top-down Proteomics Quantitation Using DYAMOND AlgorithmHui-Yin Chang; Ching-Tai Chen; Chu-Ling Ko; Yi-Ju Chen; Yu-Ju Chen ; Wen-Lian Hsu ; Chiun-Gung Juo; Ting-Yi Sung Analytical Chemistry 89(24), 13128-13136
72017CTCPI – Convolution Tree Kernel-based Chemical-Protein Interaction DetectionNeha Warikoo; Yung-Chun Chang; Po-Ting Lai; Wen-Lian Hsu 
82017CTCPI – Convolution Tree Kernel-based Chemical-Protein Interaction DetectionNeha Warikoo; Yung-Chun Chang; Po-Ting Lai; Wen-Lian Hsu 
92017Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategyNai-Wen Chang; Hong-Jie Dai; Yung-Yu Shih; Chi-Yang Wu; Mira Anne C Dela Rosa; Rofeamor P Obena; Chen, Yu-Ju ; Wen-Lian Hsu ; Yen-Jen OyangDatabase (Oxford) 2017, bax082
102016MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identificationT. Mamie Lih; Wai-Kok Choong; Chen-Chun Chen; Cheng-Wei Cheng; Hsin-Nan Lin; Ching-Tai Chen; Hui-Yin Chang; Wen-Lian Hsu ; Ting-Yi Sung Nucleic Acids Research 44(W1), W575-580
112016iMet-Q: a user-friendly tool for metabolomics quantitation using dynamic peak-width determinationHui-Yin Chang; Ching-Tai Chen; T. Mamie Lih; Ke-Shiuan Lynn; Chiun-Gung Juo; Wen-Lian Hsu ; Ting-Yi Sung PLoS ONE 11(1), e0146112
122015Informatics View on the Challenges of Identifying Missing Proteins From Shotgun ProteomicsWai-Kok Choong; Hui-Yin Chang; Ching-Tai Chen; Chia-Feng Tsai; Wen-Lian Hsu ; Ting-Yi Sung ; Yu-Ju Chen Journal of Proteome Research 14(12), 5396-5407
132015MAGIC: An Automated N-Linked Glycoprotein Identification Tool Using a Y1-Ion Pattern Matching Algorithm and in Silico MS2 ApproachKe-Shiuan Lynn; Chen-Chun Chen; T. Mamie Lih; Cheng-Wei Cheng; Wan-Chih Su; Chun-Hao Chang; Chia-Ying Cheng; Wen-Lian Hsu ; Yu-Ju Chen ; Ting-Yi Sung Analytical Chemistry 87(4), 2466-2473
142014CloudDOE: A User-Friendly Tool for Deploying Hadoop Clouds and Analyzing High-Throughput Sequencing Data with MapReduceWei-Chun Chung; Chien-Chih Chen; Jan-Ming Ho ; Chung-Yen Lin ; Wen-Lian Hsu ; Yu-Chun Wang; Der-Tsai Lee ; Feipei Lai; Chih-Wei Huang; Yu-Jung ChangPLoS One 9(6):e98146
152011Phosphoproteomics identifies oncogenic Ras signaling targets and their involvement in lung adenocarcinomas.Sudhir, P. -R.; Hsu, C. -L.; Wang, Y. -T.; Chen, Y. -J. ; Sung, T. -Y. ; Hsu, W. -L. ; Yang, U. -C.; Chen, J. -Y. PLoS One 6(5), e20199
162010An Informatics-assisted Label-free Quantitation Strategy that Depicts Phosphoproteomic Profiles in Lung Cancer Cell InvasionWang, Yi-Ting; Tsai, Chia-Feng; Hong, Tzu-Chan; Tsou, Chih-Chiang; Lin, Pei-Yi; Pan, Szu-Hua; Hong, Tse-Ming; Yang, Pan-Chyr; Sung, Ting-Yi ; Hsu, Wen-Lian ; Chen, Yu-Ju JOURNAL OF PROTEOME RESEARCH 9(11), 5582-5597
172010IDEAL-Q: An automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validationTsou, Chih-Chiang; Tsai, Chia-Feng; Tsui, Ying-Hao; Sudhir, Putty-Reddy; Wang, Yi-Ting; Chen, Yu-Ju ; Chen, Jeou-Yuan ; Sung, Ting-Yi ; Hsu, Wen-Lian Molecular and Cellular Proteomics 9(1), 131-144
182009Using Contextual Information to Clarify Gene Normalization AmbiguityPo-Ting Lai; Yue-Yang Bow; Chi-Hsin Huang; Hong-Jie Dai; Richard Tzong-Han Tsai; Wen-Lian Hsu 
192009MaXIC-Q Web: A Fully Automated Web Service Using Statistical and Computational Methods for Protein Quantitation Based on Stable Isotope Labeling and LC-MSTsou, Chih-Chiang; Tsui, Yin-Hao; Yian, Yi-Hwa; Chen, Yi-Ju; Yang, Han-Yin; Yu, Chuan-Yih; Lynn, Ke-Shiuan; Chen, Yu-Ju ; Sung, Ting-Yi ; Hsu, Wen-Lian Nucleic Acids Research 37(suppl_2), W661-W669
202007Detection of the inferred interaction network in hepatocellular carcinoma from EHCO (Encyclopedia of Hepatocellular Carcinoma genes Online)Hsu, Chun-Nan ; Lai, Jin-Mei; Liu, Chia-Hung; Tseng, Huei-Hun; Lin, Chih-Yun; Lin, Kuan-Ting; Yeh, Hsu-Hua; Sung, Ting-Yi ; Hsu, Wen-Lian ; Su, Li-Jen; Lee, Sheng-An; Chen, Chan-Han; Lee, Gen-Cher; Lee, D. T. ; Shiue, Yow-Ling; Yeh, Chang-Wei; Chang, Chao-Hui; Kao, Cheng-Yan; Huang, Chi-Ying F.BMC Bioinformatics 8, 1471-2105
211984On the maximum empty rectangle problemNaamad, A.; Lee, D. T. ; Hsu, W. L. Discrete Applied Mathematics 8(3), 267-277
22-Lipid exposure prediction enhances the inference of rotational preferences of transmembrane helicesLai, Jhih-Siang; Cheng, Cheng-Wei; Lo, Allan; Sung, Ting-Yi; Hsu, Wen-Lian PROTEINS: Structure, Function, and Bioinformatics  
23-Lipid exposure prediction enhances the inference of rotational angles of transmembrane helicesLai, Jhih-Siang; Cheng, Cheng-Wei; Lo, Allan; Sung, Ting-Yi; Hsu, Wen-Lian 
24-Efficient and interpretable prediction of protein functional classes by correspondence analysis and compact set relationsChang, Jia-Ming; Taly, Jean-Francois; Erb, Ionas; Sung, Ting-Yi; Hsu, Wen-Lian ; Tang, Chuan Yi; Notredame, Cedric; Su, Emily Chia-Yu