| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2012 | A highly efficient β-glucosidase from a buffalo rumen fungus Neocallimastix patriciarum W5. Biotechnol for Biofuel. | Chen, H. -L.; Chen, Y. -C.; Lu, M. -Y.; Chang, J. -J.; Wang, H. -T.; Ke, H. -M.; Wang, T. -Y.; Ruan, S. -K.; Wang, T. -Y.; Hong, K. -Y.; Cho, H. -Y.; Lin, W. -T.; Shih, M. -C.; Li, W. -H. | Biotechnology for Biofuels 5, 24 | | | |
| 2011 | De novo Assembly of Expressed Transcripts and Construction of a Transcriptome Database of Phalaenopsis aphrodite | Su, C. -L; Chao, Y. -T; Chang, Y. -C; Chen, W. -C; Chen, C. -Y; Lee, A. -Y; Kee, T. H; Shih, M. -C. | | | | |
| 2012 | Development of cellulosic ethanol production process vis co-culturing of artificial cellulosomal Bacillus and kefir yeast. | Ho, C-Y.; Chang, J. -J.; Lee, S. -C.; Chin, T-. Y.; Shih, M. -C.; Li, W. -H.; Huang, C. -C. | Applied Energy 100, 27-32 | | | |
| 2011 | Differential Expression of Transcription Factors of Phalaenopsis aphrodite during Reproductive Development | Su, C. -L; Chen, W. -C; Yeh, M. -L; Kee, T. H; Chen, C. -Y; Chao, Y. -T; Chang, Y. -C; Shih, M. -C. | | | | |
| 2008 | Generation and analyses of the transgenic potatoes expressing heterologous thermostable β-amylase | Lin, K. H.; Fu, H.; Chan, C. -H.; Lo, H. -F.; Shih, M. -C.; Chang, Y. M.; Chen, L. F. O. | PLANT SCIENCE 174, 649-657 | | | |
| 2013 | Global transcriptome analysis and identification of a CONSTANS-like gene family in the orchid Erycina pusilla. | Chou, M. -L.; Shih, M. -C.; Chan, M. -T.; Liao, S. -Y.; Hsu, C. -T.; Haung, Y. -T.; Chen, J. W.; Liao, D. -C.; Wu, F. -H.; Lin, C. -S. | PLANTA | | | |
| 2013 | Hypoxia tolerance, systemic signaling and ethylene | Hsu, F. -C.; Chou, M. -Y.; Peng, H. -P.; Chou, S. -J.; Shih, M. -C. | | | | |
| 2011 | Insights into transcriptional regulatory pathways on systematic communication under flooding in Arabidopsis | Hsu, F. -C.; Chou, M. -Y.; Peng, H. -P.; Chou, S. -J.; Shih, M. -C. | PLoS One 6(12), e28888 | | | |
| 2011 | Mixed culture fermentation from lignocellulosic materials using thermophilic lignocellulose-degrading anaerobes. | Lin, C. -W.; Wu, C-H.; Tran, D. -T.; Shih, M. -C.; Li, W. -H.; Wu, C. F. | PROCESS BIOCHEMISTRY 46, 489-493 | | | |
| 2010 | Omics Applications to Biofuel research. | Wang, T-Y.; Sung, H. -M.; Chen, H. -L.; Li, W. -H.; Shih, M. -C. | Biocatalysis and Molecular Engineering (New York, NYew York, USA : John Wiley & Sons) | | | |
| 2011 | Omics approach accelerates gene hunting from novel microbes: Functional characterization of cellulases identified from Neocallimastix patriciarum w5 by transcriptome and secretome | Wang, T. -Y.; Chen, H. -L.; Lu, M. -Y.; Chen, Y. -C.; Sung, H. -M.; Mao, W. -C.; Cho, H. -Y.; Ke, H. -M.; Hwa, T. -Y.; Ruan, S. -K.; Hong, K. -Y.; Wu, Y. -C.; Tsai, T. -W.; Li, W. -H.; Shih, M. -C. | Biotechnology for Biofuels 4, 24 | | | |
| 2012 | Orchidstra: an integrated Orchid functional genomics database | Su, C. -L.; Chao, Y. -T.; Yen, S. -H.; Chen, C. -Y.; Chen, W.; Chang, Y. -C. Alex; Shih, M. -C. | Plant Cell and Physiology | | | |
| 2010 | The AP2/ERF transcription factor HIF1 modulates ethylene responses during hypoxia in Arabidopsis | Yang, C. -Y; Hsu, F. -C; Li, J. -P; Wang, N. N; Shih, M. -C. | | | | |
| 2011 | The AP2/ERF transcription factor HIF1 modulates ethylene responses during hypoxia in Arabidopsis. | Yang, C. -Y.; Hsu, F. -C.; Li, J. -P.; Wang, N. N.; Shih, M. -C. | PLANT PHYSIOLOGY 156, 202-212 | | | |
| 2010 | The AP2/ERF transcription factor HIF1 modulates ethylene responses during hypoxia in Arabidopsis. | Yang, C. -Y; Hsu, F. -C; Li, J. -P; Wang, N. N; Shih, M. -C. | | | | |
| 2012 | The hypoxia responsive transcription factor WRKY22 mediates hypoxic responses and innate immunity in Arabidopsis. | Hsu, F-C; Chen, W. -C; Chou, M. -Y; Peng, H. -P; Chou, S. -J; Shih, M. -C. | | | | |
| 2010 | Transcriptional regulatory pathways associated with hypoxia responses in Arabidopsis | Hsu, F. -C; Chou, M. -Y; Peng, H. -P; Chou, S. -J; Shih, M. -C. | | | | |
| 2011 | Transcriptomic studies of rice cultivars with contrasting abiotic stress tolerance | Lin, C. -C; Shih, M. -C. | | | | |
| 2012 | Transcriptomic studies of rice cultivars with contrasting abiotic stress tolerance. | Lin, C. -C; Chou, S. -J; Yang, K. -C; Li, K. -C; Shih, M. -C. | | | | |
| 2012 | Transcriptomic studies of rice cultivars with contrasting abiotic stress tolerance. | Lin, C. -C; Chou, S. -J; Yang, K. -C; Li, K. -C; Shih, M. -C. | | | | |
