| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2010 | A Structural-Alphabet-Based Strategy for Finding Structural Motifs Across Protein Families | Wu, Chih Yuan; Chen, Yao Chi; Lim, Carmay | Nucleic Acids Res. 38(14), e150 | | | |
| 2018 | An efficient protocol for computing the pKa of Zn-bound water | Grauffel, Cédric; Chu, Benjamin; Lim, Carmay | Physical Chemistry Chemical Physics 20(47), 29637-29647 | | | |
| 2010 | Arrangement of 3D Structural Motifs in Ribosomal RNA | Sargsyan, Karen; Lim, Carmay | Nucleic Acids Res. 38, 3512-3522 | | | |
| - | Calcium Ion Selectivity in Biological Systems | Dudev, Todor; Lim, Carmay | Encyclopedia of Metalloproteins | | | |
| 2015 | Clustangles: An Open Library for Clustering Angular Data | Sargsyan, Karen; Hua, Yun Hao; Lim, Carmay | JOURNAL OF CHEMICAL INFORMATION AND MODELING 55(8), 1517-1520 | | | |
| 2009 | Combined Experiemntal and theoretic study of long-range interactions modulating dimerization and activity of yeast geranylgeranyl diphosphate synthase | Lo, Chia-Hsiang; Chang, Ying-Hsuan; Wright, Jon D.; Chen, Shih-Hsun; Kan, Daphne; Lim, Carmay; Liang, Po-Huang | | | | |
| 2012 | Competition among Ca2+, Mg2+, and Na+ for model ion channel selectivity filters: determinants of ion selectivity | Dudev, Todor; Lim, Carmay | JOURNAL OF PHYSICAL CHEMISTRY B 116(35):10703-14 | | | |
| 2018 | Competition between Li+ and Na+ in sodium transporters and receptors: Which Na+-Binding sites are “therapeutic” Li+ targets? | Dudev, Todor; Mazmanian, Karine; Lim, Carmay | Chemical Science 9(17), 4093-4103 | | | |
| 2010 | Conserved Structural Motif for Recognizing Nicotinamide Adenine Dinucleotide in Poly(ADP-Ribose) Polymerases and ADP-Ribosylating Toxins: Implications for Structure-Based Drug Design | Lee, Yu-Ming; Babu, C. Satheesan; Chen, Yao Chi; Milcic, Milos; Qu, Yuanyuan; Lim, Carmay | J. Med. Chem. 53, 4038-4049 | | | |
| 2012 | DR_bind: a web server for predicting DNA-binding sites from the protein structure based on electrostatics, evolution and geometry | Chen, Yao Chi; Wright, Jon; Lim, Carmay | NUCLEIC ACIDS RESEARCH 40(Web Server issue), W249–W256. | | | |
| 2010 | Factors Controlling the Mechanism of NAD+ NonRedox Reactions | Dudev, Todor; Lim, Carmay | J. Am. Chem. Soc. 132(46), 16533-16543 | | | |
| 2009 | Factors Governing Metal–Ligand Bond Distances and Coordination Geometries of Metal Complexes. | Kuppuraj, Gopi; Dudev, Minko; Lim, Carmay | JOURNAL OF PHYSICAL CHEMISTRY B 113:2952–2960 | | | |
| 2010 | Factors Governing the Na+ vs. K+ Selectivity in Sodium Ion Channels | Dudev, Todor; Lim, Carmay | J. Am. Chem. Soc. 132, 2321-2332 | | | |
| 2018 | Factors governing when a metal-bound water is deprotonated in proteins | Grauffel, Cédric; Lim, Carmay | Physical Chemistry Chemical Physics 20(47), 29625-29636 | | | |
| 2012 | Hidden Relationship between conserved residues and locally conserved phosphate-binding structures in NAD(P)-binding Proteins | Wu, Chih Yuan; Hua, Yun-Hao; Chen, Yao Chi; Lim, Carmay | JOURNAL OF PHYSICAL CHEMISTRY B 116 (19), 5644–5652 | | | |
| 2018 | How First Shell–Second Shell Interactions and Metal Substitution Modulate Protein Function | Mazmanian, Karine; Dudev, Todor; Lim, Carmay | Inorganic Chemistry 57(22), 14052-14061 | | | |
| 2018 | How Pb2+ Binds and Modulates Properties of Ca2+-Signaling Proteins | Dudev, Todor; Grauffel, Cédric; Lim, Carmay | Inorganic Chemistry 57(23), 14798-14809 | | | |
| 2010 | Protein/Solvent Medium Effects on Mg2+ Carboxylate Interactions in Metalloenzymes | Babu, C. Satheesan; Lim, Carmay | J. Am. Chem. Soc. 132, 6290-6291 | | | |
| 2009 | Redesign of High-Affinity Nonspecific Nucleases with Altered Sequence Preference | Wang, Yi-Ting; Wright, Jon D.; Doudeva, Lyudmila G.; Jhang, Hua-Ci; Lim, Carmay; Yuan, Hanna S. | JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 131:17345–17353 | | | |
| 2012 | The effect of metal binding on the characteristic infrared band intensities of ligands of biological interest | Dudev, Todor; Lim, Carmay | J. Mol. Struct. 1009(S1), 83-88 | | | |
