| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2004 | A probabilistic method to correlate ion pairs with protein thermostability | Huang, Shir-Ly; Wu, Li-Cheng; Huang, Hsien-Da; Liang, Han-Kuen; Ko, Ming-Tat; Horng, Jorng-Tzong | Applied Bioinformatics 3, 21-29 | | | |
| 2013 | DbPTM 3.0: An Informative Resource for Investigating Substrate Site Specificity and Functional Association of Protein Post-Translational Modifications | Lu, Cheng-Tsung; Huang, Kai-Yao; Su, Min-Gang; Lee, Tzong-Yi; Bretana, Neil Arvin; Chang, Wen-Chi; Chen, Yi-Ju; Chen, Yu-Ju ; Huang, Hsien-Da | NUCLEIC ACIDS RESEARCH 41(D1): D295-D305 | | | |
| 2012 | dbSNO: a Database of Cysteine S-nitrosylation | Lee, Tzong-Yi; Chen, Yi-Ju; Lu, Cheng-Tsung; Ching, Wei-Chieh; Teng, Yu-Chuan; Huang, Hsien-Da; Chen, Yu-Ju | BIOINFORMATICS 28(17), 2293-2295 | | | |
| 2007 | KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns | Wong, Yung-Hao; Lee, Tzong-Yi; Liang, Han-Kuen; Huang, Chia-Mao; Wang, Ting-Yuan; Yang, Yi-Huan; Chu, Chia-Huei; Huang, Hsien-Da; Ko, Ming-Tat; Hwang, Jenn-Kang | Nucleic Acids Research 35, W588-594 | | | |
| 2011 | SNOSite: exploiting maximal dependence decomposition to identify cysteine S-nitrosylation with substrate site specificity | Lee, Tzong-Yi; Chen, Yi-Ju; Lu, Tsung-Cheng; Huang, Hsien-Da; Chen, Yu-Ju | PLoS One 6(7),1-11 | | | |
| 2012 | TET1 suppresses cancer invasion via activating the tissue inhibitors of metalloproteinases | Hsu, Chih-Hung; Peng, Kai-Lin; Kang, Ming-Lun; Chen, Yi-Ren; Yang, Yu-Chih; Tsai, Chin-Hsien; Chu, Chi-Shen; Jeng, Yung-Ming; Chen, Yen-Ting; Lin, Feng-Mao; Huang, Hsien-Da; Lu, Yun-Yuh; Teng, Yu-Ching; Lin, Shinn-Tsuen; Lin, Ruo-Kai; Tang, Fan-Mei; Lee, Sung-Bau; Hsu, Huan Ming; Yu, Jyh-Cherng; Hsiao, Pei-Wen; Juan, Li-Jung | Cell Reports 2(3), 568-579 | | | |
