Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
2013 | Genetic and molecular basis of drug resistance and species-specific drug action in schistosome parasites. | Valentim, CL; Cioli, D; Chevalier, FD; Cao, X; Taylor, AB; Holloway, SP; Pica-Mattoccia, L; Guidi, A; Basso, A; Tsai, IJ; Berriman, M; Carvalho-Queiroz, C; Almeida, M; Aguilar, H; Frantz, DE; Hart, PJ; LoVerde, PT; Anderson, TJ | Science (New York, N.Y.) 342(6164), 1385-9 | | | |
2015 | Genetic Differentiation and Spatial Structure of Phellinus noxius, the Causal Agent of Brown Root Rot of Woody Plants in Japan. | Akiba, M; Ota, Y; Tsai, IJ; Hattori, T; Sahashi, N; Kikuchi, T | PloS one 10(10), e0141792 | | | |
2011 | Genome watch: Honey, I shrunk the mimiviral genome. | Tsai, IJ | Nature reviews. Microbiology 9(8), 563 | | | |
2015 | Genome-wide variation in the pinewood nematode Bursaphelenchus xylophilus and its relationship with pathogenic traits. | Palomares-Rius, JE; Tsai, IJ; Karim, N; Akiba, M; Kato, T; Maruyama, H; Takeuchi, Y; Kikuchi, T | BMC genomics 16(1), 845 | | | |
2011 | Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. | Kikuchi, T; Cotton, JA; Dalzell, JJ; Hasegawa, K; Kanzaki, N; McVeigh, P; Takanashi, T; Tsai, IJ; Assefa, SA; Cock, PJ; Otto, TD; Hunt, M; Reid, AJ; Sanchez-Flores, A; Tsuchihara, K; Yokoi, T; Larsson, MC; Miwa, J; Maule, AG; Sahashi, N; Jones, JT; Berriman, M | PLoS pathogens 7(9), e1002219 | | | |
2012 | Germline transgenesis and insertional mutagenesis in Schistosoma mansoni mediated by murine leukemia virus. | Rinaldi, G; Eckert, SE; Tsai, IJ; Suttiprapa, S; Kines, KJ; Tort, JF; Mann, VH; Turner, DJ; Berriman, M; Brindley, PJ | PLoS pathogens 8(7), e1002820 | | | |
2016 | Glycoside Hydrolase (GH) 45 and 5 Candidate Cellulases in Aphelenchoides besseyi Isolated from Bird’s-Nest Fern. | Wu, GL; Kuo, TH; Tsay, TT; Tsai, IJ; Chen, PJ | PloS one 11(7), e0158663 | | | |
2016 | HIV-1 Integrates Widely throughout the Genome of the Human Blood Fluke Schistosoma mansoni. | Suttiprapa, S; Rinaldi, G; Tsai, IJ; Mann, VH; Dubrovsky, L; Yan, HB; Holroyd, N; Huckvale, T; Durrant, C; Protasio, AV; Pushkarsky, T; Iordanskiy, S; Berriman, M; Bukrinsky, MI; Brindley, PJ | PLoS pathogens 12(10), e1005931 | | | |
2010 | Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps. | Tsai, IJ; Otto, TD; Berriman, M | Genome biology 11(4), R41 | | | |
2018 | Inferring synteny between genome assemblies: a systematic evaluation. | Liu, D; Hunt, M; Tsai, IJ | BMC bioinformatics 19(1), 26 | | | |
2009 | Population genomics of domestic and wild yeasts. | Liti, G; Carter, DM; Moses, AM; Warringer, J; Parts, L; James, SA; Davey, RP; Roberts, IN; Burt, A; Koufopanou, V; Tsai, IJ; Bergman, CM; Bensasson, D; O’Kelly, MJ; van Oudenaarden, A; Barton, DB; Bailes, E; Nguyen, AN; Jones, M; Quail, MA; Goodhead, I; Sims, S; Smith, F; Blomberg, A; Durbin, R; Louis, EJ | Nature 458(7236), 337-41 | | | |
2008 | Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle. | Tsai, IJ; Bensasson, D; Burt, A; Koufopanou, V | Proceedings of the National Academy of Sciences of the United States of America 105(12), 4957-62 | | | |
2014 | Summarizing specific profiles in Illumina sequencing from whole-genome amplified DNA. | Tsai, IJ; Hunt, M; Holroyd, N; Huckvale, T; Berriman, M; Kikuchi, T | DNA research : an international journal for rapid publication of reports on genes and genomes 21(3), 243-54 | | | |
2012 | The first green revolution. | Tsai, IJ | Nature reviews. Microbiology 10(5), 314 | | | |
2014 | The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode. | Cotton, JA; Lilley, CJ; Jones, LM; Kikuchi, T; Reid, AJ; Thorpe, P; Tsai, IJ; Beasley, H; Blok, V; Cock, PJ; Eves-van den Akker, S; Holroyd, N; Hunt, M; Mantelin, S; Naghra, H; Pain, A; Palomares-Rius, JE; Zarowiecki, M; Berriman, M; Jones, JT; Urwin, PE | Genome biology 15(3), R43 | | | |
2013 | The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery. | Laing, R; Kikuchi, T; Martinelli, A; Tsai, IJ; Beech, RN; Redman, E; Holroyd, N; Bartley, DJ; Beasley, H; Britton, C; Curran, D; Devaney, E; Gilabert, A; Hunt, M; Jackson, F; Johnston, SL; Kryukov, I; Li, K; Morrison, AA; Reid, AJ; Sargison, N; Saunders, GI; Wasmuth, JD; Wolstenholme, A; Berriman, M; Gilleard, JS; Cotton, JA | Genome biology 14(8), R88 | | | |
2016 | The genome of Onchocerca volvulus, agent of river blindness. | Cotton, JA; Bennuru, S; Grote, A; Harsha, B; Tracey, A; Beech, R; Doyle, SR; Dunn, M; Hotopp, JC; Holroyd, N; Kikuchi, T; Lambert, O; Mhashilkar, A; Mutowo, P; Nursimulu, N; Ribeiro, JM; Rogers, MB; Stanley, E; Swapna, LS; Tsai, IJ; Unnasch, TR; Voronin, D; Parkinson, J; Nutman, TB; Ghedin, E; Berriman, M; Lustigman, S | Nature Microbiology 2, 16216 | | | |
2016 | The genome of Strongyloides spp. gives insights into protein families with a putative role in nematode parasitism. | Hunt, VL; Tsai, IJ; Selkirk, ME; Viney, M | Parasitology , 1-16 | | | |
2014 | The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion. | Bennett, HM; Mok, HP; Gkrania-Klotsas, E; Tsai, IJ; Stanley, EJ; Antoun, NM; Coghlan, A; Harsha, B; Traini, A; Ribeiro, DM; Steinbiss, S; Lucas, SB; Allinson, KS; Price, SJ; Santarius, TS; Carmichael, AJ; Chiodini, PL; Holroyd, N; Dean, AF; Berriman, M | Genome biology 15(11), 510 | | | |
2013 | The genomes of four tapeworm species reveal adaptations to parasitism. | Tsai, IJ; Zarowiecki, M; Holroyd, N; Garciarrubio, A; Sanchez-Flores, A; Brooks, KL; Tracey, A; Bobes, RJ; Fragoso, G; Sciutto, E; Aslett, M; Beasley, H; Bennett, HM; Cai, J; Camicia, F; Clark, R; Cucher, M; De Silva, N; Day, TA; Deplazes, P; Estrada, K; Fernandez, C; Holland, PW; Hou, J; Hu, S; Huckvale, T; Hung, SS; Kamenetzky, L; Keane, JA; Kiss, F; Koziol, U; Lambert, O; Liu, K; Luo, X; Luo, Y; Macchiaroli, N; Nichol, S; Paps, J; Parkinson, J; Pouchkina-Stantcheva, N; Riddiford, N; Rosenzvit, M; Salinas, G; Wasmuth, JD; Zamanian, M; Zheng, Y; Cai, X; Soberon, X; Olson, PD; Laclette, JP; Brehm, K; Berriman, M | Nature 496(7443), 57-63 | | | |