| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2004 | Comparative analysis of the receptor-like kinase family in Arabidopsis and rice. | Shiu, S. -H.; Karlowski, W. M.; Pan, R.; Tzeng, Y. -H.; Mayer, K. F. X.; Li, W. H. | The Plant Cell 16(5), 1220-1234 | | | |
| 2004 | Origins, lineage-specific expansions, and multiple losses of tyrosine kinases in eukaryotes | Shiu, S. -H.; Li, W. H. | Mol. Biol. Evol. 21(5), 828-840 | | | |
| 2006 | Patterns of expansion and expression divergence in the plant polygalacturonase gene family | Kim, J.; Shiu, S. -H.; Thoma, S.; Li, W. -H.; Patterson, S. | Genome Biology 7(9), R87 | | | |
| 2007 | The nonsynonymous/synonymous substitution rate ratio versus the radical/conservative replacement rate ratio in the evolution of mammalian genes | Hanada, K.; Shiu, S. -H.; Li, W. -H. | Mol. Biol. Evol. 24(10), 2235-2241 | | | |
| 2005 | Transcription factor families have much higher expansion rates in plants than in animals. | Shiu, S. -H.; Shih, M-C.; Li, W. H. | Plant Physiology 139(1), 18-26 | | | |
