| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2006 | Patterns of expansion and expression divergence in the plant polygalacturonase gene family | Kim, J.; Shiu, S. -H.; Thoma, S.; Li, W. -H.; Patterson, S. | Genome Biology 7(9), R87 | | | |
| 2003 | Patterns of gene duplication in Saccharomyces cerevisiae and Caenorhabditis elegans. | Cavalcanti, A. R. O.; Ricardo, Ferreira; Gu, Z.; Li, W. -H. | J. Mol. Evol. 56(1), 28-37 | | | |
| 2007 | Patterns of internal gene duplication in the course of metazoan evolution | Chen, C. C.; Li, W. -H.; Sung, H. M. | Gene 396(1), 59-65. | | | |
| 2005 | Patterns of segmental duplications in the human genome. | Zhang, L.; Lu, H. H. S.; Chung, W. -Y.; Yang, J.; Li, W. -H. | Mol. Biol. Evol. 22, 135-141 | | | |
| 2008 | Prediction of human miRNAs using tissue-selective motifs in 3' UTRs | Chang, Y. -M.; Juan, H. -F.; Lee, T. -Y.; Chang, Y. -Y.; Yeh, Y. -M.; Li, W. -H.; Shih, A. C. -C. | Proceedings of the National Academy of Sciences of the United States of America 105(44), 17061-17066 | | | |
| 2007 | Proportion of solvent-exposed amino acids in a protein and rate of protein evolution | Lin, Y. -S.; Hsu, Wei-Lun; Hwang, J. -K.; Li, W. -H. | Mol. Biol. Evol. 24(4), 1005-1011 | | | |
| 2006 | Protein complexity, gene duplicability, and gene dispensability in the yeast genome. | Lin, Y. -S.; Hwang, J. -K.; Li, W. -H. | Gene 387(1-2), 109-117 | | | |
| 2006 | Protein function, connectivity, and duplicability in yeast | Prachumwat, A.; Li, W. -H. | Mol. Biol. Evol. 23(1), 30-39 | | | |
| 2006 | Radical amino acid change versus positiveselection in the evolution of viral envelope proteins | Hanada, K.; Gojobori, T.; Li, W. -H. | Gene 385, 83-88. | | | |
| 2002 | Rapid divergence in expression between duplicate genes inferred from microarray data | Gu, Z.; Nicolae, D.; Lu, H. H. -S; Li, W. -H. | Trends Genet. 18:609-613 | | | |
| 2003 | Rate of protein evolution vs. fitness effect of gene deletion | Yang, J.; Gu, Z.; Li, W. -H. | Mol. Biol. Evol. 20(5), 772-774 | | | |
| 2006 | Reorganization of adjacent gene relationships in yeast genomes by whole genome duplication and gene deletion | Byrnes, J. K.; Morris, G. P.; Li, W. -H. | Mol. Biol. Evol. 23(6), 1136-1143 | | | |
| 2002 | Signatures of domain shuffling in the human genome | Kaessmann, H.; Zöllner, S.; Nekrutenko, A.; Li, W. -H. | Genome Res. 12: 1642-1650. | | | |
| 2002 | Slow molecular clocks in Old World monkeys, apes and humans. | Yi, S.; Ellsworth, D. L.; Li, W. -H. | Mol. Biol. Evol. 19, 2191-2198 | | | |
| 1991 | Statistical methods for testing molecular phylogenies | Li, W. -H.; Gouy, M. | Phylogenetic Analysis of DNA Sequences (Oxford Press) | | | |
| 1990 | Statistical tests of molecular phylogenies | Li, W. -H.; Gouy, M. | Methods of Enzymology (Academic Press) | | | |
| 1992 | Structure and Evolution of the Apolipoprotein and Lipase Gene Families | Chan, L.; Hide, W. A.; Yang, Y. -W.; Li, W. -H. | Cellular and Molecular Biology of Atherosclerosis | | | |
| 2007 | Superconductivity in zero-dimensional indium nanoparticles | Wu, F. -Y.; Yang, C. C.; Wu, C. -M.; Wang, C. -W.; Li, W. -H. | J. Appl. Phys.101, 09G111 | | | |
| 2002 | The influence of adjacent nucleotides on the pattern of nucleotide substitution in mitochondrial introns of angiosperms. | Yang, Y. -W.; Chen, Y.; Li, W. -H. | J. Mol. Evol. 55:111-15. | | | |
| 2001 | The KA/KS ratio test for assessing the protein-coding potential of genomic regions: An empirical and simulation study | Nekrutenko, A.; Makova, K. D.; Li, W. -H. | Genome Res. 12:198-202. | | | |
