| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2013 | Chloroplast phylogenomic indicates that Ginkgo biloba is sister to cycads | Wu, CS; Chaw, SM; Huang, YY | Genome Biology and Evolution 5(1), 243-254 | | | |
| - | Chloroplast phylogenomics: Misleading factors underlie the long-debated phylogeny of Ginkgo biloba | Wu, CS; Chaw, SM; Huang, YY | Genome Biology and Evolution | | | |
| 2012 | Complete chloroplast genome of Ginkgo biloba: reveals the mechanism of inverted repeat contraction | Lin, CP; Wu, CS; Huang, YY; Chaw, SM | Genome Biology and Evolution 4, 374-381 | | | |
| 2015 | Complete genome sequence of Agrobacterium tumefaciens Ach5. | Huang, YY; Cho, ST; Lo, WS; Wang, YC; Lai, EM; Kuo, CH | Genome Announcements 3(3), pii: e00570-15 | | | |
| 2014 | De novo transcriptome sequence assembly from coconut leaves and seeds with a focus on factors involved in RNA-directed DNA methylation. | Huang, YY; Lee, CP; Fu, JL; Chang, BC; Matzke, AJ; Matzke, M | G3-Genes Genomes Genetics 4(11), 2147-2157 | | | |
| 2014 | Distinct and concurrent pathways of Pol II- and Pol IV-dependent siRNA biogenesis at a repetitive trans-silencer locus in Arabidopsis thaliana. | Sasaki, T; Lee, TF; Liao, WW; Naumann, U; Liao, JL; Eun, C; Huang, YY; Fu, JL; Chen, PY; Meyers, BC; Matzke, AJ; Matzke, M | The Plant journal : for cell and molecular biology 79(1), 127-138 | | | |
| 2014 | Distinct and concurrent pathways of Pol II- and Pol IV-dependent siRNA biogenesis at a repetitive trans-silencer locus in Arabidopsis thaliana. | Sasaki, T; Lee, TF; Liao, WW; Naumann, U; Liao, JL; Eun, C; Huang, YY; Fu, JL; Chen, PY ; Meyers, BC; Matzke, AJ; Matzke, M | The Plant journal : for cell and molecular biology 79(1), 127-38 | | | |
| 2012 | E3-independent ubiquitination of AtMAPR/MSBP1. | Kao, AL; Lin, YH; Chen, RP; Huang, YY; Chen, CC; Yang, CC | Phytochemistry 78, 7-19 | | | |
| 1996 | Persistence of Japanese encephalitis virus is associated with abnormal expression of nonstructural protein NS1 in host cells | Chen, LK; Liao, CL; Lin, CG; Lai, SC; Liu, CI; Ma, SH; Huang, YY; Lin, YL. | Virology 217: 220-229 | | | |
| 2019 | Study design and recruitment for a prospective controlled study of diabesity: Taiwan Diabesity Study. | Lee, WJ; Chang, YC ; Almalki, O; Chao, SH; Lu, CH; Chen, CC; Huang, YY; Lee, YC; Hsu, CC | Asian journal of surgery 42(1), 244-250 | | | |
| 2016 | Winding paths to simplicity: genome evolution in facultative insect symbionts. | Lo, WS; Huang, YY; Kuo, CH | FEMS Microbiology Reviews 40(6), 855-874 | | | |
