| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2018 | Borders of cis-regulatory DNA sequences preferentially harbor the divergent transcription factor binding motifs in the human genome | Huang, J.H.; Kwan, SY.; Tsai, T.Y.; Lin, T.C.; Tsai, H.K. | Frontiers in Genetics 9, 571 | | | |
| 2018 | CATANA: a tool for generating comprehensive annotations of alternative transcript events | Shiau, C.K.; Huang, J.H.; Tsai, H.K. | Bioinformatics 35(8), 1414-1415 | | | |
| 2018 | CATANA: Comprehensive Alternative Transcript Atlas based oN Annotation | Shiau, C.K.; Huang, J.H.; Tsai, H.K. | | | | |
| 2018 | CATANA: Comprehensive Alternative Transcript Atlas based oN Annotation | Shiau, C.K.; Huang, J.H.; Tsai, H.K. | Bioinformatics bty795 | | | |
| 2018 | Dynamics of cis-regulatory regions for introducing the divergent transcription factor motifs in the human genome | Kwan, S.Y.; Huang, J.H.; Tsai, Z.T.Y.; Tsai, H.K. | | | | |
| - | Expansion of transcription factor binding sites for introducing lineage-specific motifs in the promoter regions | Huang, J.H.; Kwan, SY.; Tsai, T.Y.; Tsai, H.K. | Nucleic Acids Research | | | |
| 2017 | IsoPlot: a database for comparison of mRNA isoform variations in the fruit fly and mosquitoes | Ng, I.M.; Huang, J.H.; Tsai, S.C.; Tsai, H.K. | Database (Oxford) 2017, bax069 | | | |
