Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
2019 | Detecting and prioritizing biosynthetic gene clusters for bioactive compounds in bacteria and fungi. | Tran, PN; Yen, MR; Chiang, CY; Lin, HC ; Chen, PY | Applied microbiology and biotechnology 103(8), 3277-3287 | | | |
2023 | Detecting the Interplay Between DNA Methylation and Lipid Production in Plants | Hsieh, JW; Liu, YC; Huang, LT; Nakamura, Y; Chen, PY | | | | |
2017 | Deubiquitinating Enzyme OTU5 Contributes to DNA Methylation Patterns and Is Critical for Phosphate Nutrition Signals. | Yen, MR; Suen, DF; Hsu, FM; Tsai, YH; Fu, H; Schmidt, W; Chen, PY | Plant physiology 175(4), 1826-1838 | | | |
2021 | Dissecting the Dynamic Changes of Methylome During Rice Transformation | Chen, PY | | | | |
2014 | Distinct and concurrent pathways of Pol II- and Pol IV-dependent siRNA biogenesis at a repetitive trans-silencer locus in Arabidopsis thaliana. | Sasaki, T; Lee, TF; Liao, WW; Naumann, U; Liao, JL; Eun, C; Huang, YY; Fu, JL; Chen, PY ; Meyers, BC; Matzke, AJ; Matzke, M | The Plant journal : for cell and molecular biology 79(1), 127-38 | | | |
2021 | Diversity of Fungal DNA Methyltransferases and Their Association With DNA Methylation Patterns | Nai, YS; Huang, YC; Yen, MR; Chen, PY | Frontiers in microbiology 11, 616922 | | | |
2022 | EED is required for mouse primordial germ cell differentiation in the embryonic gonad | Lowe, MG; Yen, MR; Hsu, FM; Hosohama, L; Hu, Z; Chitiashvili, T; Hunt, TJ; Gorgy, I; Bernard, M; Wamaitha, SE; Chen, PY ; Clark, AT | Developmental cell 57(12), 1482-1495.e5 | | | |
2022 | Epigenome Bioinformatics in Plants | Chen, PY | | | | |
2022 | Epigenome bioinformatics in rice and plants | Chen, PY | | | | |
2020 | Epigenomic regulation of OTU5 in Arabidopsis thaliana | Hsieh, JW; Yen, MR; Chen, PY | GENOMICS 112(5), 3549-3559 | | | |
2020 | EpiMOLAS: an intuitive web-based framework for genome-wide DNA methylation analysis | Sheng-Yao Su; I-Hsuan Lu; Wen-Chih Cheng; Wei-Chun Chung; Pao-Yang Chen ; Jan-Ming Ho ; Shu-Hwa Chen; Chung-Yen Lin | BMC Genomics 21, 163 | | | |
2019 | Exploring the transcriptome-methylome dynamics in Termitomyces eurhizus | Huang, YC; Hsieh, HM; Lin, CY; Ju, YM; Chen, PY | | | | |
2018 | Exploring the transcriptome-methylome dynamics in Termitomyces mushroom | Hsu, FM; Hsieh, HM; Lu, JH; Hsieh, CJ; Huang, YJ; Yen, MR; Lin, CY; Ju, YM; Chen, PY | | | | |
2017 | Game theory in epigenetic reprogramming: Comment on: “Epigenetic game theory: How to compute the epigenetic control of maternal-to-zygotic transition” by Qian Wang et al. | Hsu, FM; Chen, PY | Physics of life reviews 20, 143-145 | | | |
2017 | H2B ubiquitylation and the histone chaperone Asf1 cooperatively mediate the formation and maintenance of heterochromatin silencing. | Wu, MY; Lin, CY; Tseng, HY; Hsu, FM; Chen, PY ; Kao, CF | Nucleic acids research 45(14), 8225-8238 | | | |
2022 | HISTONE DEACETYLASE 15 and MOS4-associated complex subunits 3A/3B coregulate intron retention of ABA-responsive genes | Tu, YT; Chen, CY; Huang, YS; Chang, CH; Yen, MR; Hsieh, JA; Chen, PY ; Wu, K | Plant physiology 190(1), 882-897 | | | |
2019 | Investigation of Genome-wide DNA Methylation in Plants, Animals and Fungi | Chen, PY | | | | |
2020 | MethGET: web-based bioinformatics software for correlating genome-wide DNA methylation and gene expression | Teng, CS; Wu, BH; Yen, MR; Chen, PY | BMC GENOMICS 21, 375 | | | |
2023 | MethylC-analyzer: a comprehensive downstream pipeline for the analysis of genome-wide DNA methylation | Lu, RJ; Lin, PY; Yen, MR; Wu, BH; Chen, PY | Botanical studies 64(1), 1 | | | |
2023 | Methylome Imputation by Methylation Patterns | Chang, YS; Yen, MR; Chen, PY | Methods in molecular biology (Clifton, N.J.) (New York, USA : Humana) | | | |