Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
2020 | Deeply conserved synteny resolves early events in vertebrate evolution | Simakov, O; Marletaz, F; Yue, JX; O'Connell, B; Jenkins, J; Brandt, A; Calef, R; Tung, CH; Huang, TK; Schmutz, J; Satoh, N; Yu, JK ; Putnam, NH; Green, RE; Rokhsar, DS | NATURE ECOLOGY & EVOLUTION 4, 820-830 | | | |
2023 | Embryonic and post-embryonic development in the parasitic copepod Ive ptychoderae (Copepoda: Iviidae): insights into its phylogenetic position | Yu-Rong Cheng; Ching-Yi Lin; Jr-Kai Yu | PLOS ONE 18(3), e0281013 | | | |
2021 | Evidence for BMP-mediated specification of primordial germ cells in an indirect-developing hemichordate | Ching-Yi Lin; Jr-Kai Yu ; Yi-Hsien Su | Evolution & Development 23(1), 28-45 | | | |
2013 | Expression of germline markers in three species of amphioxus supports a preformation mechanism of germ cell development in cephalochordates | Zhang, QJ; Luo, YJ ; Wu, HR; Chen, YT; Yu, JK | EvoDevo 4(1), 17 | | | |
2022 | Gain of gene regulatory network interconnectivity at the origin of vertebrates | Alejandro Gil-Gálvez; Sandra Jiménez-Gancedo; Alberto Pérez-Posada; Martin Franke; Rafael D. Acemel; Che-Yi Lin; Cindy Chou; Yi-Hsien Su ; Jr-Kai Yu ; Stephanie Bertrand; Michael Schubert; Héctor Escrivá; Juan J. Tena; José Luis Gómez-Skarmeta | Proceedings of the National Academy of Sciences of the United States of America 119(11), e2114802119 | | | |
2019 | Genetic Reprogramming of Positional Memory in a Regenerating Appendage. | Wang, YT; Tseng, TL; Kuo, YC; Yu, JK ; Su, YH ; Poss, KD; Chen, CH | Current biology : CB 29(24), 4193-4207.e4 | | | |
2014 | Genome-wide survey and expression analysis of the bHLH-PAS genes in the amphioxus Branchiostoma floridae reveal both conserved and diverged expression patterns between cephalochordates and vertebrates. | Li, KL; Lu, TM ; Yu, JK | EvoDevo 5, 20 | | | |
2020 | Molecular asymmetry in the cephalochordate embryo revealed by single-blastomere transcriptome profiling | Lin, C.Y.; Lu, M.Y.J. ; Yue, J.X.; Li, K.L.; Le Petillon, Y.; Yong, L.W.; Chen, Y.H.; Tsai, F.Y.; Lyu, Y.F.; Chen, C.Y.; Hwang, S.P.L. ; Su, Y.H. ; Yu, J.K. | PLOS GENETICS 16(12), e1009294 | | | |
2023 | On the origin and evolution of RNA editing in metazoans | Pei Zhang; Yuanzhen Zhu; Qunfei Guo; Ji Li; Xiaoyu Zhan; Hao Yu; Nianxia Xie; Huishuang Tan; Nina Lundholm; Lydia Garcia-Cuetos; Michael D. Martin; Meritxell Antó Subirats; Yi-Hsien Su ; Iñaki Ruiz-Trillo; Mark Q. Martindale; Jr-Kai Yu ; M. Thomas P. Gilbert; Guojie Zhang; Qiye Li | Cell reports 42(2), 112112 | | | |
2021 | Somite Compartments in Amphioxus and Its Implications on the Evolution of the Vertebrate Skeletal Tissues | Yong, Luok Wen; Lu, Tsai-Ming ; Tung, Che-Huang; Chiou, Ruei-Jen; Li, Kun-Lung; Yu, Jr-Kai | Frontiers in Cell and Developmental Biology 9, 607057 | | | |
2020 | The evolution of the neural border and peripheral Nervous System—Insights from Invertebrate Deuterostome Animals | Yu, JK ; Su, YH | Evolving Neural Crest Cells (Boca Raton, FL, USA : CRC Press, Taylor & Francis Group, LLC) | | | |
2015 | The Nodal signaling pathway controls left-right asymmetric development in amphioxus | Soukup, V; Yong, LW; Lu, TM ; Huang, SW; Kozmik, Z; Yu, JK | EvoDevo 6, 5 | | | |
2021 | The Ontology of the Amphioxus Anatomy and Life Cycle (AMPHX) | Bertrand, S; Carvalho, JE; Dauga, D; Matentzoglu, N; Daric, V; Yu, JK ; Schubert, M; Escrivá, H | Frontiers in Cell and Developmental Biology 9, 668025 | | | |
2023 | Three amphioxus reference genomes reveal gene and chromosome evolution of chordates | Zhen Huang; Luohao Xu; Cheng Cai; Yitao Zhou; Jing Liu; Zaoxu Xu; Zexian Zhu; Wen Kang; Wab Cen; Surui Pei; Duo Chen; Chenggang Shi; Xiaotong Wu; Yongji Huang; Chaohua Xu; Yanan Yan; Ying Yang; Ting Xue; Wenjing He; Xuefeng Hu; Yanding Zhang; Youqiang Chen; Changwei Bi; Chunpeng He; Lingzhan Xue; Shijun Xiao; Zhicao Yue; Yu Jiang; Jr-Kai Yu ; Erich D. Jarvis; Guang Li; Gang Lin; Qiujin Zhang; Qi Zhou | Proceedings of the National Academy of Sciences of the United States of America 120(10), e2201504120 | | | |
2019 | Using Amphioxus as a Basal Chordate Model to Study BMP Signaling Pathway. | Yong, LW; Kozmikova, I; Yu, JK | Methods in Molecular Biology 1891, 91-114 | | | |