| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2004 | Derivation and Analysis of Fragment Libraries of Protein Structures | Lee, In-Yee; Soong, Ta-Tsen; Ho, Jan-Ming; Hwang, Ming-Jing | | | | |
| 2004 | Derivation and Analysis of Fragment Libraries of Protein Structures | Lee, I. Y.; Soong, T. T.; Ho, J. M.; Hwang, M. J. | Fourth IEEE Symposium on Bioinformatics and Bioengineering 516-521 | | | |
| 1997 | Derivation of Clase II Force Fields. 4. van der Waals Parameters of Alkali Metal Cations and Halide Anions | Peng, Z.; Ewig, C. S.; Hwang, M. J. ; Waldman, M.; Hagler, A. T. | Journal of Physical Chemistry A 101, 7243-7252 | | | |
| 1998 | Derivation of class II force fields. VI. Carbohydrate compounds and anomeric effects | Hwang, M. J. ; Ni, X.; Waldman, M.; Ewig, C. S.; Hagler, A. T. | Biopolymers 45, 435-468 | | | |
| 2001 | Derivation of class II force fields. VIII. Derivation of a general quantum mechanical force field for organic compounds | Ewig, C. S.; Berry, R.; Dinur, U.; Hill, J. R.; Hwang, M. J. ; Li, H.; Liang, C.; Maple, J.; Peng, Z.; Stockfisch, T. P.; Thacher, T. S.; Yan, L.; Ni, X.; Hagler, A. T. | J Comput Chem 22, 1782-1800 | | | |
| 1998 | Derivation of class II force fields: V. Quantum force field for amides, peptides, and related compounds | Maple, J. R.; Hwang, M. J. ; Jalkanen, K. J.; Stockfisch, T. P.; Hagler, A. T. | Journal of Computational Chemistry 19(4), 430-458 | | | |
| 2020 | Detection and Classification of Cardiac Arrhythmias by a Challenge-Best Deep Learning Neural Network Model | Chen, Tsai-Min; Huang, Chih-Han; Shih, Edward S.C.; Hu, Yu-Feng; Hwang, Ming-Jing | iScience 23(3) ,100886 | | | |
| 2003 | Directional shape complementarity at the protein-DNA interface | Yeh, C. S.; Chen, F. M.; Wang, J. Y.; Cheng, T. L.; Hwang, M. J. ; Tzou, W. S. | J Mol Recognit 16, 213-222 | | | |
| 2004 | Discovery of Recurrent Structural Motifs for Approximating Three-Dimensional Protein Structures | Soong, T. T.; Hwang, M. J. ; Chen, C. M. | J Chin Chem Soc 51, 1107-1114 | | | |
| 2019 | Epigenetic silencing of the synthesis of immunosuppressive Siglec ligand glycans by NF-κB/EZH2/YY1 axis in early-stage colon cancers | Huang, HC; Chao, CC; Wu, PH; Chung, HY; Lee, HY; Suen, CS; Hwang, MJ ; Cai, BH; Kannagi, R | Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1862(2), 173-183 | | | |
| 1998 | Estimates of relative binding free energies for HIV protease inhibitors using different levels of approximations | Lee, C. Y.; Yang, P. K.; Tzou, W. S.; Hwang, M. J. | Protein Eng 11, 429-437 | | | |
| 2002 | GEM: a Gaussian Evolutionary Method for predicting protein side-chain conformations | Yang, J. M.; Tsai, C. H.; Hwang, M. J. ; Tsai, H. K.; Hwang, J. K.; Kao, C. Y. | Protein Sci 11, 1897-1907 | | | |
| 2003 | Human and Mouse Genome Comparison Using Genome-Wide Unique Sequences | Liao, Ben-Yang; Chang, Yu-Jung; Ho, Jan-Ming; Hwang, Ming-Jing | | | | |
| 2006 | In silico identification and comparative analysis of differentially expressed genes in human and mouse tissues | Pao, S. Y.; Lin, W. L.; Hwang, M. J. | BMC Genomics 7, 86 | | | |
| 1997 | Introduction to Protein Structure Predictions | Tzou, W. S.; Hwang, M. J. | The Chinese Chem. Soc., Taiwan China 55, 101-109 | | | |
| 2022 | JAK2-CHK2 signaling safeguards the integrity of the mitotic spindle assembly checkpoint and genome stability. | Chowdhury, MAN; Wang, SW; Suen, CS; Hwang, MJ ; Hsueh, YA; Shieh, SY | Cell death & disease 13(7), 619 | | | |
| 2020 | Lumenal Galectin-9-Lamp2 interaction regulates lysosome and autophagy to prevent pathogenesis in the intestine and pancreas | Sudhakar, Janaki N.; Lu, Hsueh-Han; Chiang, Hung-Yu; Suen, Ching-Shu; Hwang, Ming-Jing ; Wu, Sung-Yu; Shen, Chia-Ning ; Chang, Yao-Ming; Li, Fu-An ; Liu, Fu-Tong ; Shui, Jr-Wen | Nature Communications 11, 4286 | | | |
| 2014 | Methods for Predicting Protein–Ligand Binding Sites | Xie, ZR; Hwang, MJ | Molecular Modeling of Proteins, Methods in Molecular Biology (New York : USA: Humana Press Springer Science+Business Media New York) | | | |
| 1999 | Modeling helix-turn-helix protein-induced DNA bending with knowledge-based distance restraints | Tzou, W. S.; Hwang, M. J. | Biophys J 77, 1191-1205 | | | |
| 2004 | Mutations at KFRDI and VGK domains of enterovirus 71 3C protease affect its RNA binding and proteolytic activities | Shih, S. R.; Chiang, C.; Chen, T. C.; Wu, C. N.; Hsu, J. T.; Lee, J. C.; Hwang, M. J. ; Li, M. L.; Chen, G. W.; Ho, M. S. | J Biomed Sci 11, 239-248 | | | |
