| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2019 | A next generation approach to species delimitation reveals the role of hybridization in a cryptic species complex of corals. | Andrea M. Quattrini; Tiana Wu; Keryea Soong; Ming-Shiou Jeng ; Yehuda Benayahu; Catherine S. McFadden | BMC Evolutionary Biology 19, 116 | | | |
| 2018 | A Preliminary Study on the Cold-Seep Carbonates of the Maanshan Formation, Hengchun Peninsula, Taiwan | Jeng, M. S. ; H. S. Mii.; S. C. Chen; S. W. Wang | Collection and Research 31, 9-23 | | | |
| 2022 | Crown-of-thorns starfish outbreak at Taiping Island (Itu Aba), Spratlys, South China Sea | Heng, Wei Khang; Ho, Ming-Jay ; Kuo, Chao-Yang; Huang, Ya-Yi; Ko, Chia-Ying; Jeng, Ming-Shiou ; Chen, Chaolun Allen | Bulletin of Marine Science 98(1), 101-102 | | | |
| 2020 | Fishing pressure occurs down to the lower mesophotic coral ecosystem in Lyudao, Taiwan | Ming-Jay Ho ; Chao-Yang Kuo; Hung-Yi Wu; Ming-Shiou Jeng ; Shiahn-Wern Shyue; Chaolun Allen Chen | Galaxea, Journal of Coral Reef Studies 22(1), 29-30 | | | |
| 2020 | Global distribution and cleanup opportunities for macro ocean litter: a quarter century of accumulation dynamics under windage effects | Ko, Chia-Ying; Hsin, Yi-Chia ; Jeng, Ming-Shiou | Environmental Research Letters 15(10), 104063 | | | |
| 2018 | Monitoring multi-year macro ocean litter dynamics and backward-tracking simulation of litter origins on a remote island in the South China Sea | Ko, C. Y.; Y. C. Hsin ; T. L. Yu; K. L. Liu; F. K. Shiah ; M.S. Jeng | Environmental Research Letters 13, 044021 | | | |
| 2016 | Occurrence of the rare lobster Palinustus unicornutus Berry, 1979(Decapoda : Palinuridae) in Taiwan. | Chan, T.Y.; C.C. Lin; M.S. Jeng | CRUSTACEANA 89(13), 1501-1507 | | | |
| 2018 | Outbreak of coral-killing cyanobacteriasponge, Terpios hoshinota, in Taiping Island (Itu Aba), Spratlys, South China Sea | Sung-Yin Yang; Hsing-Ju Chen; Ming-Jay Ho ; Yen-Jia Chen; Ya-Yi Huang; Wenhua Savanna Chow; Sen-Lin Tang ; Ming-Shiou Jeng ; Chaolun Allen Chen | BULLETIN OF MARINE SCIENCE 94(4), 1543-1544 | | | |
| 2016 | Strong Ion Regulatory Abilities Enable the Crab Xenograpsus testudinatus to Inhabit Highly Acidified Marine Vent Systems | Hu, Marian Y.; Guh, Ying-Jey; Shao, Yi-Ta; Kuan, Pou-Long; Chen, Guan-Lin; Lee, Jay-Ron; Jeng, Ming-Shiou ; Tseng, Yung-Che | Frontiers in Physiology 7, 14 | | | |
| 2018 | Trophic structure and energy flow in a shallow-water hydrothermal vent: Insights from a stable isotope approach | Chang, N. N.; L. H. Lin; T. H. Tu; M. S. Jeng ; Y. Chikaraishi; P. L. Wang | PLoS One 13(10), e0204753 | | | |
| 2020 | Urgent Mitigation of the Ecological Disaster on Formosa Bank | Jeng, M.S. | International Ocean Information(國際海洋資訊雙月刊) 6, 31-34 | | | |
| 2021 | What is for dessert? Crown-of-thorns starfish feeds on non-scleractinian anthozoans at Taiping Island (Itu Aba), Spratlys, South China Sea | Kuo, Chao-Yang; Ho, Ming-Jay ; Heng, Wei Khang; Huang, Ya-Yi; Ko, Chia-Ying; Jiang, Guo-Chen; Jeng, Ming-Shiou ; Chen, Chaolun Allen | Marine Biodiversity 52, 2 | | | |
| 2020 | 七美淺海珊瑚及硨磲貝生態資源調查(澎湖縣政府農漁局委託計畫) | 鄭明修 | 七美淺海珊瑚及硨磲貝生態資源調查, 121 | | | |
| 2020 | 南海珊瑚礁生態資源的變遷與永續 | 鄭明修 | | | | |
| 2020 | 即刻救援台灣淺堆的生態浩劫 | 鄭明修 | 國際海洋資訊雙月刊 第6期，頁6-8 | | | |
| 2019 | 台灣海洋國家公園對極端氣候的調適對策 | 鄭明修 | | | | |
| 2020 | 台灣淺堆抽砂的危機 | 鄭明修 | | | | |
| 2020 | 台灣淺堆的大量抽砂造成生態浩劫 | 鄭明修 | 大自然 第142期，頁35-36 | | | |
| 2020 | 太平島不太平靜 - 南海主權風雲再起與其珊瑚礁的保育策略 | 鄭明修 | 漫步生態秘徑：探索生物多樣性的奧妙 (台北 : 中央研究院) | | | |
| 2021 | 太平島棘冠海星大爆發造成珊瑚礁生態大浩劫 | 鄭明修 | 大自然 第143期，頁58-65 | | | |
