| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| - | A Chemically Functionalized Magnetic Nanoplatform for Rapid and Specific Biomolecular Recognition and Separation | Lin, Po-Chiao; Yu, Ching-Ching; Wu, Huan-Ting; Lu, Ying-Wei; Han, Chia-Li; Su, An-Kai; Chen, Yu-Ju ; Lin, Chun-Cheng | BIOMACROMOLECULES 14 (1), pp 160–168 | | | |
| 2021 | A data-independent acquisition-based global phosphoproteomics system enables deep profiling | Kitata, Reta Birhanu; Choong, Wai-Kok; Tsai, Chia-Feng; Lin, Pei-Yi; Chen, Bo-Shiun; Chang, Yun-Chien; Nesvizhskii, Alexey I.; Sung, Ting-Yi; Chen, Yu-Ju | Nature Communications 12, 2539 | | | |
| 1996 | A High Resolution Photoionization Study of Ne and Ar: Observation of Mass Analyzed Threshold Ions Using Synchrotron Radiation and Direct Current Electric Fields | Hsu, C. -W.; Lu, K. T.; Evans, M.; Chen, Yu-Ju ; Ng, C. Y.; Heimann, P. | JOURNAL OF CHEMICAL PHYSICS 105, 3950-3961 | | | |
| 1997 | A Molecular Beam Photoionization Mass Spectrometric Studies of Cr(CO)6, Mo(CO)6, and W(CO)6 | Chen, Yu-Ju ; Liao, C. L.; Ng, C. Y. | JOURNAL OF CHEMICAL PHYSICS 107, 4527-4536 | | | |
| 2008 | A Multiplexed Quantitative Strategy for Membrane Proteomics: Opportunities for Mining Therapeutic Targets for Autosomal Dominant Polycystic Kidney Disease | Han, Chia-Li; Chien, Chih-Wei; Chen, Wen-Cheng; Chen, Yet-Ran; Wu, Chien-Peng; Li, Hung ; Chen, Yu-Ju | MOLECULAR & CELLULAR PROTEOMICS 7(10), 1983-1997 | | | |
| 1998 | A study of Dissociation of CH3CH2SH+ by Collisional Activation: Evidence of Non-Statistical Behavior | Fenn, P. T.; Chen, Yu-Ju ; Stimson, S.; Ng, C. Y.; Li, Wai- Kee; Ma, N. L. | JOURNAL OF CHEMICAL PHYSICS 108, 8020-8028 | | | |
| 2022 | Advances in data-independent acquisition mass spectrometry towards comprehensive digital proteome landscape | Kitata Reta Birhanu; Yang Jhih‐Ci; Chen Yu‐Ju | Mass Spectrometry Reviews 42(6), 2324-2348 | | | |
| 2018 | Alteration of mesenchymal stem cells polarity by laminar shear stimulation promoting β-catenin nuclear localization | Chen, Wei-Ta; Hsu, Wei-Tse; Yen, Meng-Hua; Changou, Chun A.; Han, Chia-Li; Chen, Yu-Ju ; Cheng, Ji-Yen; Chang, Tzu-Hao; Lee, Oscar Kuang-Sheng; Ho, Jennifer Hui-Chun | Biomaterials 190-191, 1-10 | | | |
| 2021 | An Enzyme-Mediated Aza-Michael Addition Is Involved in the Biosynthesis of an Imidazoyl Hybrid Product of Conidiogenone B | Hewage, Ranuka T.; Huang, Rou-Jie; Lai, Shu-Jung; Lien, Ya-Chu; Weng, Shao-Hsing; Li, Dehai; Chen, Yu-Ju ; Wu, Shih-Hsiung ; Chein, Rong-Jie ; Lin, Hsiao-Ching | Organic Letters 23(5), 1904-1909 | | | |
| 2011 | An Informatics-assisted Label-free Approach for Personalized Tissue Membrane Proteomics: Case Study on Colorectal Cancer | Han, Chia-Li; Chen, Jinn-Shiun; Chan, Err-Cheng; Wu, Chien-Peng; Yu, Kun-Hsing; Chen, Kuei-Tien; Tsou, Chih-Chiang; Tsai, Chia-Feng; Chien, Chih-Wei; Kuo, Yung-Bin; Lin, Pei-Yi; Yu, Jau-Song; Hsueh, Chuen; Chen, Min-Chi; Chan, Chung-Chuan; Chang, Yu-Sun; Chen, Yu-Ju | MOLECULAR & CELLULAR PROTEOMICS 10,1-15 | | | |
| 2010 | An Informatics-assisted Label-free Quantitation Strategy that Depicts Phosphoproteomic Profiles in Lung Cancer Cell Invasion | Wang, Yi-Ting; Tsai, Chia-Feng; Hong, Tzu-Chan; Tsou, Chih-Chiang; Lin, Pei-Yi; Pan, Szu-Hua; Hong, Tse-Ming; Yang, Pan-Chyr; Sung, Ting-Yi ; Hsu, Wen-Lian ; Chen, Yu-Ju | JOURNAL OF PROTEOME RESEARCH 9(11), 5582-5597 | | | |
| 2014 | An Intelligent System for Identifying Acetylated Lysine on Histones and Nonhistone Proteins | Cheng-Tsung Lu; Tzong-Yi Lee; Yu-Ju Chen ; Yi-Ju Chen | BioMed research International 528650 | | | |
| 2013 | An iTRAQ Proteomic Study Reveals an Association between Diet-induced Enhanced Fatty-acid Metabolism and the Development of Glucose Intolerance in Prediabetic Mice | Ho, Jennifer; Lee, Oscar; Fu, Yun-Ju; Shih, Hung-Ta; Tseng, Chien-Yu; Chung, Cheng-Chih; Han, Chia-Li; Chen, Yu-Ju | JOURNAL OF PROTEOME RESEARCH 12 (3), pp1120-1133 | | | |
| 2005 | Application of Mass Spectrometry in Clinical Proteomics | Chang, Yu-Wang; Chen, Shu-Hua; Chen, Yu-Ju | Formosan Journal of Medicine 9, 637-649 | | | |
| 2017 | Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy | Nai-Wen Chang; Hong-Jie Dai; Yung-Yu Shih; Chi-Yang Wu; Mira Anne C Dela Rosa; Rofeamor P Obena; Chen, Yu-Ju ; Wen-Lian Hsu ; Yen-Jen Oyang | Database (Oxford) 2017, bax082 | | | |
| 1997 | Bond Selective Dissociation of CH3SH+ and C2H5SH+ via Collisional Activation | Chen, Yu-Ju ; Fenn, P. T.; Ng, C. Y. | JOURNAL OF CHEMICAL PHYSICS 106, 8274-8277 | | | |
| 2014 | Cancer-associated fibroblasts regulate the plasticity of lung cancer stemness via paracrine signalling | Chen, WJ; Ho, CC; Chang, YL; Chen, HY; Lin, CA; Ling, TY; Yu, SL; Yuan, SS ; Chen, YJ ; Lin, CY; Pan, SH; Chou, HY; Chen, YJ; Chang, GC; Chu, WC; Lee, YM; Lee, JY; Lee, PJ; Li, KC; Chen, HW; Yang, PC | Nature communications 5, 3472 | | | |
| 2005 | Carbohydrate-Encapsulated Gold Nanoparticles for Rapid Target Protein Identification and Binding Epitope Mapping | Chen, Yu-Ju ; Chen, Shu-Hua; Chien, Yuh-Yih; Chang, Yu-Wan; Liao, Hsin-Kai; Chang, Chih-Yang; Jan, Mi-Dan; Wang, Ken-Tseng; Lin, Chun-Cheng | CHEMBIOCHEM 6, 1169-1173 | | | |
| 2014 | Characterization and Identification of Protein O-GlcNAcylation Sites with Substrate Specificity | Hsin-Yi Wu; Cheng-Tsung Lu; Hui-Ju Kao; Yi-Ju Chen; Yi-Ju Chen ; Tzong-Yi Lee | BMC BIOINFORMATICS 15, S1 | | | |
| 1995 | Combining Theory with Experiment: Assessment of the Thermochemistry of SFn, SFn+, and SFn- | Cheung, Y. -S.; Chen, Yu-Ju ; Ng, C. Y.; Chiu, See-Wing; Li, Wai- Kee | JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 117,9725-9733 | | | |
