公開日期 | 題名 | 作者 | 關聯 | scopus | WOS | 全文 |
2010 | Gene family size conservation is a good indicator of evolutionary rates | Chen, Feng-Chi; Chen, Chueng-Jong; Li, Wen-Hsiung ; Chuang, Trees-Juen | Molecular Biology and Evolution 27(8), 1750-1758 | | | |
2020 | Genome-wide, integrative analysis of circular RNA dysregulation and the corresponding circular RNA-microRNA-mRNA regulatory axes in autism | Yen-Ju Chen; Chia-Ying Chen; Te-Lun Mai; Chih-Fan Chuang; Yu-Chen Chen; Sachin Kumar Gupta; Laising Yen; Yi-Da Wang; Trees-Juen Chuang | GENOME RESEARCH 30(3), 375-391 | | | |
2007 | Human-specific insertions and deletions inferred from mammalian genome sequences | Chen, F. C.; Chen, C. J.; Li, W. H. ; Chuang, T. J. | Genome Research 17(1), 16-22 | | | |
2014 | Integrative transcriptome sequencing identifies trans-splicing events with important roles in human embryonic stem cell pluripotency | Chan-Shuo Wu; Chun-Ying Yu; Ching-Yu Chuang; Michael Hsiao; Cheng-Fu Kao; Hung-Chih Kuo; Trees-Juen Chuang | Genome Research 24(1), 25-36 | | | |
2018 | Integrative transcriptome sequencing reveals extensive alternative trans-splicing and cis-backsplicing in human cells | Chuang, Trees-Juen ; Chen, Yen-Ju; Chen, Chia-Ying; Mai, Te-Lun; Wang, Yi-Da; Yeh, ChungShu; Yang, Min-Yu; Hsiao, Yu-Ting; Chang, Tien-Hsien ; Kuo, Tzu-Chien; Cho, Hsin-Hua; Shen, Chia-Ning ; Kuo, Hung-Chih ; Lu, Mei-Yeh ; Chen, Yi-Hua; Hsieh, Shan-Chi; Chiang, Tai-Wei | NUCLEIC ACIDS RESEARCH 46(7), 3671-3691 | | | |
2014 | Is an Observed Non-co-linear RNA Product Spliced in trans, in cis or just in vitro? | Chun-Ying Yu; Hsiao-Jung Liu; Li-Yuan Hung; Hung-Chih Kuo; Trees-Juen Chuang | NUCLEIC ACIDS RESEARCH 42(14), 9410-9423 | | | |
2007 | Mathematical Properties of Some Measures of Evolutionary Distance | Tzeng, Yun-Huei; Li, Wen-Hsiung ; Chuang, Trees-Juen | Journal of Theoretical Biology 245(4), 790-792 | | | |
2019 | NCLcomparator: systematically post-screening non-co-linear transcripts (circular, trans-spliced, or fusion RNAs) identified from various detectors | Chia-Ying Chen; Trees-Juen Chuang | BMC BIOINFORMATICS 20, 3 | | | |
2007 | Opposite Evolutionary Effects between Different Alternative Splicing Patterns | Chen, Feng-Chi; Chaw, Shu-Miaw ; Tzeng, Yun-Huei; Wang, Sheng-Shun; Chuang, Trees-Juen | Molecular Biology and Evolution 24(7), 1443-1446 | | | |
2007 | Plant Gene and Alternatively Spliced Variant Annotator. A Plant Genome Annotation Pipeline for Rice Gene and Alternatively Spliced Variant Identification with Cross-Species Expressed Sequence Tag Conservation from Seven Plant Species | Chen, FC; Wang, SS; Chaw, SM ; Huang, YT; Chuang, TJ | Plant Physiology 143(3), 1086-1095 | | | |
2014 | The evolution of the coding exome of the Arabidopsisspecies - the influences of DNA methylation, relative exon position, and exon length | Feng-Chi Chen; Trees-Juen Chuang ; Hsuan-Yu Lin; Min-Kung Hsu | BMC EVOLUTIONARY BIOLOGY 14, 145 | | | |
2022 | Trans-genetic effects of circular RNA expression quantitative trait loci and potential causal mechanisms in autism | Te-Lun Mai; Chia-Ying Chen; Yu-Chen Chen; Tai-Wei Chiang; Trees-Juen Chuang | MOLECULAR PSYCHIATRY 27, 4695-4706 | | | |
2019 | Transcriptomopathies of Pre- and Post-Symptomatic Frontotemporal Dementia-like Mice with TDP-43 Depletion in Forebrain Neurons | Lien-Szu Wu; Wei-Cheng Cheng; Chia-Ying Chen; Ming-Che Wu; Yi-Chi Wang; Yu-Hsiang Tseng; Trees-Juen Chuang ; C-K James Shen | Acta Neuropathologica Communications 7(1), 50 | | | |