| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 1997 | A model for Fis N-terminus, Fis-invertase recognition | Tzou, W. S.; Hwang, M. J. | FEBS Lett 401, 1月5日 | | | |
| 2007 | A network perspective on the topological importance of enzymes and their phylogenetic conservation | Liu, W. C. ; Lin, W. H.; Davis, A. J.; Jordan, F.; Yang, H. T.; Hwang, M. J. | BMC Bioinformatics 8, 121 | | | |
| 2021 | ALDH2 deficiency induces atrial fibrillation through dysregulated cardiac sodium channel and mitochondrial bioenergetics: A multi-omics analysis | Hu, Yu-Feng; Wu, Chih-Hsun; Lai, Tsung-Ching; Chang, Yu-Chan; Hwang, Ming-Jing ; Chang, Ting-Yung; Weng, Ching-Hui; Chang, Peter Mu-Hsin; Chen, Che-Hong; Mochly-Rosen, Daria; Huang, Chi-Ying F.; Chen, Shih-Ann | Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 1867(5), 166088 | | | |
| 2004 | Alternative Alignments from Comparison of Protein Structures | Shih, E. S. C.; Hwang, M. J. | Proteins 56, 519-527 | | | |
| 2007 | An analytical rate expression for the kinetics of gene transcription mediated by dimeric transcription factors | Yang, H. T.; Hsu, C. P. ; Hwang, M. J. | The Journal of Biochemistry 142(2), 135-144 | | | |
| 2010 | An interaction-motif-based scoring function for protein-ligand docking | Xie, Z. R.; Hwang, M. -J. | BMC Bioinformatics 11, 298 | | | |
| 2022 | Artificial Intelligence-Enabled Electrocardiogram Improves the Diagnosis and Prediction of Mortality in Patients With Pulmonary Hypertension | Liu, Chih-Min; Shih, Edward, S.C.; Chen, Jhih-Yu; Huang, Chih-Han; Wu, I-Chien; Chen, Pei-Fen; Higa, Satoshi; Yagi, Nobumori; Hu, Yu-Feng; Hwang, Ming-Jing ; Chen, Shih-Ann | JACC: Asia 2(3 Part 1), 258-270 | | | |
| 2020 | BGN/TLR4/NF-κB Mediates Epigenetic Silencing of Immunosuppressive Siglec Ligands in Colon Cancer Cells | Huang, HC; Cai, BH; Suen, CS; Lee, HY; Hwang, MJ ; Liu, FT; Kannagi, R | CELLS 9(2), 397 | | | |
| 2015 | Candidate tumor suppressor B-cell translocation gene 3 impedes neoplastic progression by suppression of AKT | Cheng, YC; Chen, PH; Chiang, HY; Suen, CS; Hwang, MJ ; Lin, TY; Yang, HC; Lin, WC; Lai, PL; Shieh, SY | Cell Death & Disease 6, e1584 | | | |
| 2010 | Chapter 4: Non-sequential protein structure comparisons | Shih, E. S; Hwang, M. -J. | Sequence and Genome Analysis: Methods and Applications (香港 : iConcept Press) | | | |
| 2005 | Classification of Protein 3D Folds by Hidden Markov Learning on Sequences of Structural Alphabets | Wang, S. -L.; Chen, C. -M.; Hwang, M. J. | Proceedings of The Third Asia-Pacific Bioinformatics Conference, 65-72 | | | |
| 2011 | Cleavage-site Specificity of Prolyl Endopeptidase FAP Investigated with a Full-Length Protein Substrate | Huang, CH; Suen, CS; Lin, CT; Chien, CH; Lee, HY; Chung, KM; Tsai, TY; Jiaang, WT; Hwang, MJ ; Chen, X. | JOURNAL OF BIOCHEMISTRY 149(6), 685-692 | | | |
| 1999 | Conformational Analysis of Three Pyrophosphate Model Species: Diphosphate, Methyl Diphosphate, and Triphosphate | Hwang, M. J. ; Chu, P. Y.; Chen, J. C.; Chao, I. | Journal of Computational Chemistry 20(16), 1702-1715 | | | |
| 2022 | CRM1-spike-mediated nuclear export of hepatitis B virus encapsidated viral RNA | Yang, Ching-Chun; Chang, Chih-Hsu; Chen, Heng-Li; Chou, Ming-Chieh; Yang, Ching-Jen; Jhou, Ren-Shiang; Huang, Er-Yi; Li, Hung-Cheng; Suen, Ching-Shu; Hwang, Ming-Jing ; Shih, Chiaho | Cell Reports 38(10), 110472 | | | |
| 2004 | Derivation and Analysis of Fragment Libraries of Protein Structures | Lee, In-Yee; Soong, Ta-Tsen; Ho, Jan-Ming; Hwang, Ming-Jing | | | | |
| 2004 | Derivation and Analysis of Fragment Libraries of Protein Structures | Lee, I. Y.; Soong, T. T.; Ho, J. M.; Hwang, M. J. | Fourth IEEE Symposium on Bioinformatics and Bioengineering 516-521 | | | |
| 1997 | Derivation of Clase II Force Fields. 4. van der Waals Parameters of Alkali Metal Cations and Halide Anions | Peng, Z.; Ewig, C. S.; Hwang, M. J. ; Waldman, M.; Hagler, A. T. | Journal of Physical Chemistry A 101, 7243-7252 | | | |
| 1998 | Derivation of class II force fields. VI. Carbohydrate compounds and anomeric effects | Hwang, M. J. ; Ni, X.; Waldman, M.; Ewig, C. S.; Hagler, A. T. | Biopolymers 45, 435-468 | | | |
| 2001 | Derivation of class II force fields. VIII. Derivation of a general quantum mechanical force field for organic compounds | Ewig, C. S.; Berry, R.; Dinur, U.; Hill, J. R.; Hwang, M. J. ; Li, H.; Liang, C.; Maple, J.; Peng, Z.; Stockfisch, T. P.; Thacher, T. S.; Yan, L.; Ni, X.; Hagler, A. T. | J Comput Chem 22, 1782-1800 | | | |
| 1998 | Derivation of class II force fields: V. Quantum force field for amides, peptides, and related compounds | Maple, J. R.; Hwang, M. J. ; Jalkanen, K. J.; Stockfisch, T. P.; Hagler, A. T. | Journal of Computational Chemistry 19(4), 430-458 | | | |
