| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2009 | Analyzing the breakpoint regions of genomic rearrangement events at nucleotide level by sequence alignment | Chu, Te-Chin; Liu, Tsunglin; Lee, D. T. ; Lee, Greg C.; Shih, Arthur Chun-Chieh | | | | |
| 2009 | GR-Aligner: an algorithm for aligning pairwise genomic sequences containing rearrangement events | Te-Chin Chu; Tsunglin Liu; D.T. Lee ; Greg C. Lee; Arthur Chun-Chieh Shih | Bioinformatics 25(17), 2188-2193 | | | |
| 2007 | Phylo-mLogo: an interactive and hierarchical multiple-logo visualization tool for alignment of many sequences | Shih, Arthur Chun-Chieh ; Lee, D. T. ; Peng, Chin-Lin; Wu, Yu-Wei | BMC Bioinformatics 8, 63 | | | |
| 2006 | SinicView: A visualization environment for comparisons of multiple nucleotide sequence alignment tools | Shih, Arthur Chun-Chieh ; Lee, D. T. ; Lin, Laurent; Peng, Chin-Lin; Chen, Shiang-Heng; Wu, Yu-Wei; Wong, Chun-Yi; Chou, Meng-Yuan; Shiao, Tze-Chang; Hsieh, Mu-Fen | BMC Bioinformatics 7, 103 | | | |
| 2005 | SinicView: An Interactive Visualization Tool for Comparison of Multiple Sequence Alignment Results | Arthur Chun-Chieh Shih ; D.T. Lee ; Laurent Lin; Chin-Lin Peng; Shiang-Heng Chen; Chun-Yi Wong; Meng-Yuan Chou; Tze-Chang Shiao | | | | |
| 2009 | Uncovering small RNA-mediated responses to phosphate-deficiency in Arabidopsis by deep sequencing | Hsieh, L. -C.; Lin, S. -I.; Shih, A C. -C. ; Chen, J. -W.; Lin, W. -Y.; Tseng, C. -Y.; Li, W. -H. ; Chiou, T. -J. | PLANT PHYSIOLOGY 151(4), 2120-2132 | | | |
