| 公開日期 | 題名 | 作者 | 關聯 | scopus | WOS | 全文 |
| 2019 | 〈1920-1930 年代烈嶼與福建的商船貿易活動：林天助先生訪問紀錄〉，收錄於《臺灣文獻》第70卷第1期，頁212-226 | 林玉茹訪問、紀錄 | 南投 : 國史館臺灣文獻館 | | | |
| 2003 | 1945年以來臺灣學者臺灣史研究的回顧：課題與研究趨勢的討論（1945-2000） | 林玉茹 | 臺灣史料研究 第21輯，頁2-33 | | | |
| 2009 | 2007年臺灣經濟史的回顧與展望 | 林玉茹 | 漢學研究通訊 28卷4期，頁17-21 | | | |
| 2008 | 2007年臺灣經濟史研究的回顧與展望 | 林玉茹 | | | | |
| 2009 | 2008年臺灣經濟史回顧與展望：產業史、企業史及總論 | 林玉茹 | | | | |
| 2010 | 2009年度臺灣產業史研究的回顧與展望 | 林玉茹 | | | | |
| 2011 | 2009年度臺灣產業史研究的回顧與展望 | 林玉茹 | 成大歷史學報 第41期，頁239-264 | | | |
| 2011 | 2010年度臺灣史研究文獻類目 | 林玉茹 ; 林文凱; 陳培豐; 賀安娟; 詹素娟 | 臺北 | | | |
| 2012 | 2011年度臺灣史研究文獻類目 | 林玉茹 ; 林文凱; 陳培豐; 賀安娟; 詹素娟 | 臺北 | | | |
| 2013 | 2012年度臺灣史研究文獻類目 | 林玉茹主編 | 臺北 : 中央研究院臺灣史研究所 | | | |
| 2015 | Communication and Trade: The Message Transmission of Jiao Merchants in Taiwan and Ningbo at the End of the Nineteenth Century | 林玉茹 | | | | |
| 2012 | Competition and Cooperation: the Trade Pattern of Treaty Ports in 19th Century Taiwan | Lin, Yu-ju | | | | |
| 2018 | Conflict and the Aboriginal-boundary Policy of the Qing Empire: The Purple Aboriginal-boundary Map of 1784 | Lin, Yuju | East Asian History 42, 33-45 | | | |
| 2017 | Continuity and breakdown: Taiwan’s customs service during the Japanese occupation, 1895–1945 | Lin, Yuju | International Journal of Maritime History 29(4), 855-874 | | | |
| 2013 | Correspondence between Jiao Merchants’ and Ningbo-Quanzhou-Taiwan Trade in Late Qing Dynasty | Lin, Yu-ju | | | | |
| 2023 | From China to Japan: Tax and the Great Shift of Taiwan Seafood Importation (1890-1905) | Lin, Yuju | | | | |
| 2023 | From Customary Practice to International Law: Disputes and Responses of Jiao Merchants in East Asian Trade (1880–1905) | Lin, Yuju | | | | |
| - | From Customary Practice to International Law: Disputes and Responses of Jiao Merchants in East Asian Trade (1880–1905) | Lin, Yuju | The Cambridge History of International Law (Cambridge University Press) | | | |
| 2010 | From Supercargo to Mutual Commissioned Trade: Traditional Junk Trade between Lugang Guild Merchants and China Proper during the Qing Dynasty | Lin, Yu-JuLin, Yu-ju | East Asian Maritime History vol. 9, pp. 195-220. | | | |
| 2017 | Institutional Profile: Institute of Taiwan History(ITH), Academia Sinica & A Brief Introduction to Two Special-Themed Panels | Lin, Yuju | Eats News | | | |
